| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2505 |
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| Symbol | |
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| ID | 3934964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2505518 |
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| End bp | 2506234 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637904865 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_510447 |
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| Protein GI | 89054996 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.791438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.178168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAC TGTTAGTCGA AGACGATCCC ACCACGTCAC GAAGCATTGA AATGATGCTC
AAGCACGCGA ACCTCAACGT TTATTCCACC GATCTGGGGG AGGAGGGGAT GGATCTCGCA
AAACTCTACG ACTACGACAT CATCCTTCTC GACCTTAATC TTCCCGATGT CTCCGGCCAT
GAGGTGCTGC GTCACTTGCG GACAGCCCGC GTTGATACGC CGATCCTGAT CCTCTCTGGC
CTCGATGACC CGGAGAACAA GCTGAAAGGG TTCGGATTTG GGGCCGACGA TTATCTGACC
AAACCGTTCC ACCGCGAAGA ACTTGTGGCC CGCATTCACG CCATCATCCG TCGCTCCAAG
GGGCACGCTC AGTCGGTCAT CGATACCGGG CGAATTTCGG TTAACCTGGA TGCCAAGACC
GTCGATGTGG CAGGAACGCC CGTGCATCTG ACCGGCAAGG AATACCAGAT GCTGGAACTG
CTATCGCTGC GCAAGGGCAC GACGCTGACG AAAGAGATGT TCCTCAATCA TTTGTATGGC
GGCATGGACG AGCCCGAGTT GAAGATCATC GACGTCTTCA TCTGCAAACT GCGCAAAAAG
CTGTCTGAGG CAACGGGCGG CGACACCTAT ATCGAGACGG TTTGGGGCCG CGGCTACGTG
CTTCGTGACC CGGTCTCGGC GGCGGATATG GACATGGATA TGGTTGCCAC GGGGTAA
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| Protein sequence | MRVLLVEDDP TTSRSIEMML KHANLNVYST DLGEEGMDLA KLYDYDIILL DLNLPDVSGH
EVLRHLRTAR VDTPILILSG LDDPENKLKG FGFGADDYLT KPFHREELVA RIHAIIRRSK
GHAQSVIDTG RISVNLDAKT VDVAGTPVHL TGKEYQMLEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LSEATGGDTY IETVWGRGYV LRDPVSAADM DMDMVATG
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