Gene Jann_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2501 
Symbol 
ID3934960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2499498 
End bp2499857 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content61% 
IMG OID637904861 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_510443 
Protein GI89054992 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.25614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGT TTGATCCGGC GACACTTCGC TATGATGTGA ACGGCTTGAT CCCCTGTATT 
GCGCAGCAGG AGGGCACCGG CGAGGTGCTG ATGATGGCGT GGATGAATGC CGATTCTGTG
GCCCGGACGT TAGAGAGCGG GCGAGTGACC TATTGGAGCC GCTCTCGCCA GGCGTTCTGG
GTGAAGGGGG AGACCAGCGG GCATGTGCAG GAACTGGTGG ATCTGCGCGT GGATTGTGAT
CGGGATTGCC TTCTGGCCGT GGTCCGGCAA ACCGGGCCCG CGTGTCACAC GAACCGGCGC
GTGTGTTTCT ATACCTCGGT CACAAGCGGT GAAGAGGTGG AGTTGATGGC GCCGGAATAG
 
Protein sequence
MTQFDPATLR YDVNGLIPCI AQQEGTGEVL MMAWMNADSV ARTLESGRVT YWSRSRQAFW 
VKGETSGHVQ ELVDLRVDCD RDCLLAVVRQ TGPACHTNRR VCFYTSVTSG EEVELMAPE