| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2498 |
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| Symbol | |
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| ID | 3934957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2496542 |
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| End bp | 2497918 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904858 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_510440 |
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| Protein GI | 89054989 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.218883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA ACACACAACT CACCATAATC GGCGGCGGCA TGGCCGGGTC TGAGGCCGCC
TGGCAGGCCG CCAACCTTGG CGTCAACGTG CGCCTGATCG AGATGCGGCC CAAGGTCGAA
ACCTTCGCCC ACCGCACCGG CAATCTGGCC GAGATGGTGT GCTCCAACTC CTTCCGCTCC
GACGACAGCG AGCAGAACGC CGTGGGCCTG TTGCATTGGG AAATGCGGGC GGCCAATTCC
GTGATCATGC ACACCGCAGA TTCCCACAAG CTGCCCGCAG GCGGCGCGCT CGCGGTGGAT
CGGGATCCGT TTGCAGAGGC CGTCACGGCG AAACTACACG CCCATCCCAA CATCGAAATC
ACCTATGGCG AGGTCACCGA CCTCCCTGCC GCGGGCCCAA CGATCATCGC CACCGGCCCC
CTCACCGGCA GCGCTTTGGC CGATGCGATA GCCCGCGAAG CAGGCCAGGA CGCGCTGGCG
TTTTTCGACG CCATCGCCCC CATCGTCTAC GCCGACAGCA TCGATATGGA CATTGCCTGG
CGACAATCCC GCTATGACAA GGGCGACACG CTGGAGGAGC AGCAGGCCTA TATCAATTGC
CCTCTGACGC GCGATCAATA CGAGGCCTTC ATCGACGCGC TCCTCTCTGC CGACAAGACC
CAGTTCAAGG ACGGCGAGAC GGCTGGTTAC TTCGACGGCT GCCTTCCCAT CGAGGTCATG
GCCGAGCGGG GCCGTGAAAC CCTGCGCTTT GGCCCGATGA AGCCCGTGGG CCTCACCAAT
CCCCATGACC CGCAGACCAA GGCCTATGCC GTGGTCCAGC TACGCCGTGA TAACGCTTTG
GGAACGCTCT ACAATATCGT GGGCTTCCAG ACCAAGATGA CCTATGGCGC GCAGAAGCAA
GTCTTCGCGA TGATCCCCGG CCTGCAGGAG GCCAGTTTCG CGCGTCTGGG TGGCATCCAC
CGCAACACCT TCATCAACTC GCCCACGCTG CTGGACGACC AGATGCGCCT TCGCTCCAAG
CCACATATCC GGTTCGCGGG CCAGATTACC GGCGTCGAAG GCTATGTGGA GAGCGCCTCC
ATGGGTCTTC TCGCAGGGCG CATGGCCGCT GCCGAGATCC TGGGTGAGAC GTTGCCAGAC
CTCCCCGACA CGACCGCCAT GGGCGCGCTC GTCACGCACA TCACCGGCGG GGCGGACGCG
AAAACGTTTC AGCCGATGAA CGTGAATTTC GGCCTGTTTC CCCCGGTGGA GGGCCTGAAG
GGCGGCCGCC GGGGCCGCAA GGACCGCTAC AAGGCCTATA CCGACCGCGC CAAAGCTGCG
TGGACCAACT GGCTCACGCC CCAGACATCA TTGGGCGGAT CGCAAGCGGC GGAGTGA
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| Protein sequence | MTQNTQLTII GGGMAGSEAA WQAANLGVNV RLIEMRPKVE TFAHRTGNLA EMVCSNSFRS
DDSEQNAVGL LHWEMRAANS VIMHTADSHK LPAGGALAVD RDPFAEAVTA KLHAHPNIEI
TYGEVTDLPA AGPTIIATGP LTGSALADAI AREAGQDALA FFDAIAPIVY ADSIDMDIAW
RQSRYDKGDT LEEQQAYINC PLTRDQYEAF IDALLSADKT QFKDGETAGY FDGCLPIEVM
AERGRETLRF GPMKPVGLTN PHDPQTKAYA VVQLRRDNAL GTLYNIVGFQ TKMTYGAQKQ
VFAMIPGLQE ASFARLGGIH RNTFINSPTL LDDQMRLRSK PHIRFAGQIT GVEGYVESAS
MGLLAGRMAA AEILGETLPD LPDTTAMGAL VTHITGGADA KTFQPMNVNF GLFPPVEGLK
GGRRGRKDRY KAYTDRAKAA WTNWLTPQTS LGGSQAAE
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