Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2487 |
Symbol | aroB |
ID | 3934945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2483404 |
End bp | 2484516 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637904846 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_510429 |
Protein GI | 89054978 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.13771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0143197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATA CGGTCCGGGT CGAGTTGGGC GCGCGCGCCT ATGATGTTGA AATCGGGGCA GGTCTTATCG CCTCCGCCGG GGCCCGCATC GCGCCGCTGC TGTCGCGGCC CAAAGTGTGG ATCGTCACGG AAGAGACGGT CGCCGCCCTG CATATGGATG CCCTGCGCGC CGGTCTTGAC GCCGCCAATA TCGCCAGCGA GGCCCTGGTT CTGCCCCCCG GCGAGGCCAC CAAATCCTGG CCGCATCTGC AACGCATCGC CGATTGGCTC CTGTCCGAGC GGGTGGAGCG CGCGGATATC GTGATTGCCT TCGGCGGCGG CGTGATCGGT GATCTTGCGG GCTTTGCCGC CGCCATCCAC CGGCGCGGCA TCCGTTTTGT GCAGATCCCC ACGTCACTTT TGGCGCAGGT TGACAGCTCT GTCGGTGGCA AGACCGGTAT CAACGCGCCA CAAGGCAAGA ACCTGATCGG CGCGTTTCAC CAACCGTCGC TGGTGCTGGC CGACATCGAC GTTCTGGGCA CACTGATGCC GCGCGATTTT CTGGCGGGCT ACGGCGAAGT GGCGAAATAC GGTATGCTCG GCGACGCCCC CTTCTTCGAG TGGCTGGAGG CCAACGGCCC CGCCATGGCC AAGGGTGACC CCGCGCTGCG GCAAGAGGCG GTGCGCCGCT CCGTCCAGAT GAAGGCAGAT ATCGTCGCCC GCGATGAGAC GGAGCAGGGT GATCGCGCGC TCCTCAACCT TGGCCACACG TTTTGTCATG CCCTGGAAGC CGCCACGGGG TATTCCGACC GGCTGCTGCA TGGCGAAGGG GTCGCCATTG GCTGCGCCTT GGCGTTTGAG CTATCGGCCC GTCTGGGCCT GTGTTCGCAA GAAGACCCCA GCCGCGTGCG CGCCCATCTG GCCGCCATGG GCACAAGGCG CGATCTGTCG GACATTCCCG GTGACCTGCC CGACGCAGAC GCCCTCATCA CGTTGATGGG CCAGGATAAA AAGGTCGTGG CAGGGCAACT CCGCTTCATC CTCGCGCGCG GCATCGGCCA CGCGTTTGTC ACTGCCGACG TGCCCACAGA TGCGGTCAAA GCCCTCCTCA CGGACGCGCT CGCCGGTCGA TAG
|
Protein sequence | MSDTVRVELG ARAYDVEIGA GLIASAGARI APLLSRPKVW IVTEETVAAL HMDALRAGLD AANIASEALV LPPGEATKSW PHLQRIADWL LSERVERADI VIAFGGGVIG DLAGFAAAIH RRGIRFVQIP TSLLAQVDSS VGGKTGINAP QGKNLIGAFH QPSLVLADID VLGTLMPRDF LAGYGEVAKY GMLGDAPFFE WLEANGPAMA KGDPALRQEA VRRSVQMKAD IVARDETEQG DRALLNLGHT FCHALEAATG YSDRLLHGEG VAIGCALAFE LSARLGLCSQ EDPSRVRAHL AAMGTRRDLS DIPGDLPDAD ALITLMGQDK KVVAGQLRFI LARGIGHAFV TADVPTDAVK ALLTDALAGR
|
| |