| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2479 |
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| Symbol | |
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| ID | 3934937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2475147 |
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| End bp | 2476568 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904838 |
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| Product | ABC transporter related |
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| Protein accession | YP_510421 |
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| Protein GI | 89054970 |
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| COG category | [G] Carbohydrate transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component
[COG1129] ABC-type sugar transport system, ATPase component
[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0564449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0314231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACGA CGGCTCAGGC GGCCCATGAC CGTGTCGATG CGCGATTGCC GCTGGAGGCC
CGGTTTGGGT CCCTGTCGGT CGGCCAACGC CAGCTGGTCG CGATCTGCCG CAGCCTCGCC
AAAGACGCGC GGTTGGTTTT CATGGACGAG CCGGGCGCCT CCCTCATCCG GCAGGAGGTC
GAGCACCTGT TCCGCGTGGT CCGCCGCCTG AAAGATCAGG GCGTGTCCAT CGTATTTGTC
AGCCACCGCC TTGATGAGGT GCTTGAGATG GCTGACCGCG TCACCGTCAT CCGGGATGGA
AAGAAGATCT CCACGATGCC GGCGGCGGAT ATGACCGAAG ACCTGCTGAC CCAACACATG
ATGGGAGAGC GGATTGAGGC GGAATTCCTG ACATCCGACA CCGGCGGCGG AGCGAGCGTT
CTGGAAGTGC GGGATCTGTC GCGCGCGGGT GCGTTTGACG GGATGACCCT GTCGGGCGGT
AATCAGCAGT GCGTCGTCCT GGGCAAATGG CTGGCCACCA ATCCCCGGAT CCTGATCCTC
GACAGCCCGA CCATCGGCGT CGACGTCAAG AACGAGAGGT CAATCTACGA GATCGCCCAA
GACCGCGCCC GCCAAAAGGT GCCGGTGATT ATGATCTCTG ACGAGCTGAA TGAGCTGTAT
TTCAACGCCA ACCGAATTTT TCACACGGCC GATGGACAGA GACGGGCGGA ATACCGCCCC
CTTGAGATCA CGCGGGAGGC AATGACAGAT GCGATTTGTG CCTGGATGGC TTGGCATCAC
GGAAGGGGTC TTCTGGTGAT CAGCATCTTT TTGGTGGCGC TGTTCTCCGC CCTGTCGCCG
TATTTCTACT CGGCCTCCAA TGCGACGGAT CTGCTGGAAC CCTACGCTGT CACGACGGTC
CTGGCCGCAG GCGTGGTCGT CGTGCTGATA TCGGGCGGGC TGAACCTTGC CATCATCGCC
ACGGCGAATG CCTCCACGCT GTTGATGGTA TGGCTTCTGA ACGGTCTGAT CTGGCCGGAT
GTCACGGGCG CAGAGCAGAT TGCGTGGATC GCGTTGGTCT TTGCGGCGGG CCTTGCGCTG
TGCGTCGCCA TTGGCGTGAT CAACGGACGT CTCGTGGCCA TTGTCGGCGT GCATCCGATC
CTCGCCACGC TGGAACCCAT GACATTGATC AATGGCGTGA ACCCGTATCC GACCAATGGC
GGCACGCTGT CGGGCCTGCG GGACCCGGTC CTGTTCATCT CGAACGGACC GATCTTCCAC
AAGCCCCTGT CGCTGTTCAT CTTTCTGGCC GCCGCTGGCG CGGTGTCCTT CCTTCTGGGG
CAGATGCCCT TGGGCATCCG CATTCGCATT GTGGGCTCAA ACCTCAACGC CGCATGGTTT
TCAGGCGCGA ATACGTCGGC TGTGCTGATC AGGTCTACGT GA
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| Protein sequence | MRTTAQAAHD RVDARLPLEA RFGSLSVGQR QLVAICRSLA KDARLVFMDE PGASLIRQEV
EHLFRVVRRL KDQGVSIVFV SHRLDEVLEM ADRVTVIRDG KKISTMPAAD MTEDLLTQHM
MGERIEAEFL TSDTGGGASV LEVRDLSRAG AFDGMTLSGG NQQCVVLGKW LATNPRILIL
DSPTIGVDVK NERSIYEIAQ DRARQKVPVI MISDELNELY FNANRIFHTA DGQRRAEYRP
LEITREAMTD AICAWMAWHH GRGLLVISIF LVALFSALSP YFYSASNATD LLEPYAVTTV
LAAGVVVVLI SGGLNLAIIA TANASTLLMV WLLNGLIWPD VTGAEQIAWI ALVFAAGLAL
CVAIGVINGR LVAIVGVHPI LATLEPMTLI NGVNPYPTNG GTLSGLRDPV LFISNGPIFH
KPLSLFIFLA AAGAVSFLLG QMPLGIRIRI VGSNLNAAWF SGANTSAVLI RST
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