Gene Jann_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2473 
Symbol 
ID3934931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2471426 
End bp2471908 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID637904832 
Producthypothetical protein 
Protein accessionYP_510415 
Protein GI89054964 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.211459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0219449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGGA CATTCCTGAT GACATTGGCG GTTGCGGTGA CCGCGTTCGC CACCACGCCT 
GCGGCTGCGC GGTGCAGTGA CGACCGCGTG GAAGTGCGCG GCGATTGGGG CATTGCCCGG
TTCCGCGTGG CGATTGCCGA CACGGTTGCG GAGCGCGCGC AGGGGTTGAT GAATGTGCCG
GAGATGCCGC AACGCGCCGG GATGCTGTTT ATCTATGAGC GCCCGCAACG GGTCAGCTTC
TGGATGGAGA ATACGCTGAT CCCACTCGAC ATGATCTTCG CCGATGAGAC CGGGCTGATC
GTCAACGTCC ATTCCAATGC GGTCCCCTTG GATCGCACGC CCATTCCCGG CGGCAGCAGT
GACATTGTCT ATGTGCTGGA GATCAACGGT GGCCTGGCCG AGGACCTGGG CCTTGCGGCA
GGCGACCAGC TGCGCCATCC CTCCGTGCCC CAGGACACGG CCCTTTGGCC ATGCGACGGC
TGA
 
Protein sequence
MLRTFLMTLA VAVTAFATTP AAARCSDDRV EVRGDWGIAR FRVAIADTVA ERAQGLMNVP 
EMPQRAGMLF IYERPQRVSF WMENTLIPLD MIFADETGLI VNVHSNAVPL DRTPIPGGSS
DIVYVLEING GLAEDLGLAA GDQLRHPSVP QDTALWPCDG