| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2462 |
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| Symbol | |
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| ID | 3934919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2455745 |
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| End bp | 2456551 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904820 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_510404 |
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| Protein GI | 89054953 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.529684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000432103 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGATA CGTCCCGCAA ACCGATCGCC CATGCCGTGG CCTCCCTCGG CAAACTGCGT
ATGCAGGGCG CGTGGCGGGT GGAACTGCTC CACGCCTCCC CGCGCAACAG GCTGTACTGG
ATCACCCGGG GGCAAGGCCG GGTGACGGTC AATTGCGTGA CCCGGGGCTA TGGGCCCAAT
ACCGCCGTCT TCGTGCCGGC CCGCGTGCCC ATGGCGTTGG AACTGGCCGC ACAAACGCAG
GGGCTGGAGC TGTGCCTGCC CCCCGATGAT ACACTAAAAC TGCCCGTGGA TCCGTTCCAT
ATGCGCGTCT CTCACATCGA AAGCCAGGCA AGCCTGACCT CCCATATCGA GAAGATCGAG
GGGGAGCTTG TGGCCCAGGC TCCGGCGATG GATCAGGCGC TGACGGCCTA TTCGCTGCTG
GTCTCCACCT GGATGACGCG CGAACTGGCG CGCCAGGAAG GGGCGATCGG GCGCGAGGGC
GCGCACCGGC TGGCCGAAAT GTTCGCGCAG CGGATGGAGG CGCAATTCCG CACCGGCTCC
GGCGTAGCCG ATTACGCCAG GCAATTGCAG GTCACGCCCA CACATCTCAG CCGGGTGTGC
CGTGAGGCGT CGGGCCGCCC GGCCCTGGCC CTCCTCAATG AGCGGATCAT GTATGAAGCG
CGCCGCCTGC TTCTGGAAAC GGATCTGCCC GCCCGCGAAA TCGCGCAACA GCTTGGGTTC
TCGTCGGCGG CCTATTTCAC GCGCGCCTTC AGCCAGGCCG TGGGCCGGAC GCCGTCGGAC
TTTCGTAAGC CCGCGCGCCG GAGCTGA
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| Protein sequence | MFDTSRKPIA HAVASLGKLR MQGAWRVELL HASPRNRLYW ITRGQGRVTV NCVTRGYGPN
TAVFVPARVP MALELAAQTQ GLELCLPPDD TLKLPVDPFH MRVSHIESQA SLTSHIEKIE
GELVAQAPAM DQALTAYSLL VSTWMTRELA RQEGAIGREG AHRLAEMFAQ RMEAQFRTGS
GVADYARQLQ VTPTHLSRVC REASGRPALA LLNERIMYEA RRLLLETDLP AREIAQQLGF
SSAAYFTRAF SQAVGRTPSD FRKPARRS
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