| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2461 |
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| Symbol | miaA |
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| ID | 3934918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2454720 |
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| End bp | 2455586 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637904819 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_510403 |
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| Protein GI | 89054952 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.55205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000458787 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGATAAACA TCAACAACAT TAACCCAGAG AAGCCGGTTC TGATCGTGGG CCCCACGGCC
TCCGGCAAAA CGTCGCTGGC CATTGCCATC GCGCAGGCCC AGGGCCGTGT TGTGGTCAAC
GCCGATGCGT TGCAGGTCTA TGACGGCTGG CGCGTGCTGA CGGCCCGTCC CACGCCGGAG
GAGGAGGACG CCGTCCCCCA TCACCTCTAC GGCCATGTGC CCTTTACCGC CCATTACGAC
GTCGGCCAAT GGTTGCAGGA TCTGACCCCC TTCCTTGCGC AGAACCCGGT CATCGTCGGT
GGCACCGGCC TTTACTTTCG GGCCCTCACG CAGGGCCTCG CCGACATCCC CGCTATCCCG
CCGGACATCC GCGCCGAGGC GGACGCGCGC TCCCACACCC AGCGCCTGGC TGACCTCCAC
GAAGGCGACC CCGCGCTTGT CGCCCGCATC GATTGCGACA ACCCCATGCG CGTGCAGCGC
GGGTGGGAGG TGCTGCGCGC CACCGGGCGG CCCCTGTCGG CCTGGCAGGA TGAGACACCG
CCCCCGCTCC TGCCCCTCGG CAACACCACC CCCCTCGCCC TGATGCCGGA CCGCGACTGG
CTCAACGCCC GCATCGCACA GCGCTTTGAC CAGATGCTCA ACGAAGGTGC TTTGGATGAA
GCGCGCGCCA ACCTCCCCCG CTGGTCCAGC GCGGGCGGGG CCGCGAAGGC CATCGGCGCG
CCCGAGCTTA TCGCCCACCT ACACGGAACC CTGCCCCTTG CCGCCGCGCG CGACGCCGCC
GTCACGGCCA CCCGCCAATA CGCCAAGCGC CAACGCAGCT GGCAACGCAG CAATACCCAG
GCCTGGCAGA GCGTCCCTCT GCCATAG
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| Protein sequence | MININNINPE KPVLIVGPTA SGKTSLAIAI AQAQGRVVVN ADALQVYDGW RVLTARPTPE
EEDAVPHHLY GHVPFTAHYD VGQWLQDLTP FLAQNPVIVG GTGLYFRALT QGLADIPAIP
PDIRAEADAR SHTQRLADLH EGDPALVARI DCDNPMRVQR GWEVLRATGR PLSAWQDETP
PPLLPLGNTT PLALMPDRDW LNARIAQRFD QMLNEGALDE ARANLPRWSS AGGAAKAIGA
PELIAHLHGT LPLAAARDAA VTATRQYAKR QRSWQRSNTQ AWQSVPLP
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