| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2457 |
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| Symbol | |
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| ID | 3934914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2451060 |
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| End bp | 2451785 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904815 |
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| Product | undecaprenyl pyrophosphate synthetase |
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| Protein accession | YP_510399 |
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| Protein GI | 89054948 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000413258 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCACGC AATCCGAAAC ATCCAATGCC CCAAAGCATG TCGCCATCAT CATGGACGGC
AACGGGCGGT GGGCGCAGAT GCGCCACCGG CCAAGGCTGG TGGGTCACCA TGCTGGCGCC
AAGCGGGTAC GGGAAATCGT GCGCGCGGCC CCTGATCACG GCGTGAAATA CCTGACGATT
TTTGCCTTCT CGACCGAGAA CTGGAAGCGC ACGCAGACCG AAGTGGCGGG GCTGATGAAG
CTGTTCAAGC GCTATATCCG GCGCGAGGCG CAGAACCTGC TGGACGAAGG CGTGTGCGTG
CGCTTCATCG GCGACCGCGT GCGGCTGGAG CCTGCGCTGG TCGATCTGAT GGACGGGCTG
GAGCTTCTGA CCGCCGACAA TGACAAGGTG CATCTGACCA TCGCACTCAA CTATGGCGGC
CGGGACGAGG TTGCGCGCGC CGCCAAGCGC ATGGCCTACG ATGTGTCCAT GGGCAAGCTG
AACCCGCGCG ATGTGTGTGA CGAGACATTC CCCAAATACC TCGACACCCA CGTTCTGCCG
GACCCGGATC TGGTGATCCG CACCAGCGGC GAGGCGCGGA TTTCCAACTT CCTGCTCTGG
CAATCGGCCT ATGCGGAATA TGAGTTCATC GACACGCTCT GGCCTGATTT CACGGCGGAC
GTCTTCGCCA GTGTTCTTGG CCGCTTTGGC GCGCGCGACC GTCGTTTCGG CGCTGTGAAA
GCCTAA
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| Protein sequence | MPTQSETSNA PKHVAIIMDG NGRWAQMRHR PRLVGHHAGA KRVREIVRAA PDHGVKYLTI
FAFSTENWKR TQTEVAGLMK LFKRYIRREA QNLLDEGVCV RFIGDRVRLE PALVDLMDGL
ELLTADNDKV HLTIALNYGG RDEVARAAKR MAYDVSMGKL NPRDVCDETF PKYLDTHVLP
DPDLVIRTSG EARISNFLLW QSAYAEYEFI DTLWPDFTAD VFASVLGRFG ARDRRFGAVK
A
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