| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2455 |
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| Symbol | |
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| ID | 3934912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2449022 |
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| End bp | 2450203 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904813 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_510397 |
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| Protein GI | 89054946 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000483068 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCCCCC GGCCCGAGAA GCGGCGGGTC AGCATTTTCG GGGCCACCGG CTCCATCGGC
CAGAACACCA TTGATCTGAT CGCCCGCGCG CCGGAGGCCT ATGATGTTGT GGCGCTGACC
GGCGCGCGCA ACATCGCCCA ACTTGCCGCA GATGCGAGGA GGCTTTCGGC GAGTATCGCC
GTAACAGCCG AGGAGGAGCT GCTGCCCGAT CTGCGCGCAG CGCTGGAGGG ATCCGGGGTG
GAGGCCGCCG CAGGCGAGGC CGCGCTGCTG GAGGCCGCTG ACCGTCCTGC CGACTGGATC
ATGTCTGCCA TTGTCGGGGC CGCCGGCCTT GCCCCCGGCT TCCGGGCGCT GCGCCACGGC
ACGACGCTTG CATTGGCGAA CAAGGAAAGT CTGGTGACGG CCGGGCCGCT CTTGCTGGCT
GAGGCTGCGA CACACGGGGC CACGATCCTA CCCGTGGACA GTGAACATTC CGCCGTTTTT
CAAGCGCTTG TCGGCGAAGA TATCGCCGCC GTTGAGCGTA TCATCATCAC TGCATCCGGC
GGTGGCCTGC GCGATTGGCC GGAGGATGAT CTGGCCCGCG CCACCCCAGC GGATGCAGGC
GCGCATCCGA ATTGGGATAT GGGCCAACGG ATCACTATTG ATTCAGCCTC CATGTTTAAC
AAAGCCATGG AGCTGATTGA AACGAAAGAG TTTTTCGGCG TTTCACCCGC AAGGATCGAG
GCCGTGGTCC ATCCCCAATC GCTGATCCAC GCCCTTGTGG GCTTCACCGA CGGCGCGCTG
ATGGCGCATC TCGGGCCGCC GGATATGCGC CACGCCATCG GATATGCGCT GAACTACCCC
GACCGCGCGC ATCTGCCTGT CGACCGCCTT GACCTGGCCC AGATCGCCCG GCTGGAGTTT
CATGCCCCCT CCGATACCCG ATATCCGGCC CTTAAAATCG CCCGCGAGGT GATGCAGACG
GGCGGTCAAT CGGGCTGCAT CTTCAACGCC GCAAAGGAAA TCGCGCTGGA TGGGTTCCTG
GCCGGGAAAA TCGGGTTCAT GGACATGTCA GGCATCGTTT CCGACACACT CGACGCTATG
TCGTCAAAGA ACAGCCTTTC AAATGCCCCA GAAACCCTTG AGGACGTGCT GCAAACTGAC
CAAATGGCTA GGAACATAGC CAGCGCGCGC CTGGCGCGAT AA
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| Protein sequence | MSPRPEKRRV SIFGATGSIG QNTIDLIARA PEAYDVVALT GARNIAQLAA DARRLSASIA
VTAEEELLPD LRAALEGSGV EAAAGEAALL EAADRPADWI MSAIVGAAGL APGFRALRHG
TTLALANKES LVTAGPLLLA EAATHGATIL PVDSEHSAVF QALVGEDIAA VERIIITASG
GGLRDWPEDD LARATPADAG AHPNWDMGQR ITIDSASMFN KAMELIETKE FFGVSPARIE
AVVHPQSLIH ALVGFTDGAL MAHLGPPDMR HAIGYALNYP DRAHLPVDRL DLAQIARLEF
HAPSDTRYPA LKIAREVMQT GGQSGCIFNA AKEIALDGFL AGKIGFMDMS GIVSDTLDAM
SSKNSLSNAP ETLEDVLQTD QMARNIASAR LAR
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