| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2454 |
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| Symbol | |
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| ID | 3934911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2447635 |
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| End bp | 2448966 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904812 |
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| Product | peptidase RseP |
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| Protein accession | YP_510396 |
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| Protein GI | 89054945 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000129388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAATTCC TCCCCGCCTT CGGCAATATC GGCTTCACGC TTGTGGCTTT TGTCGCCGCC
CTTTCGATCA TCGTGGCGAT CCACGAATAC GGCCATTACA TCGTGGGCCG TTGGTCGGGC
ATCCATGCGG AGGTGTTTTC CATCGGCTTC GGCCCGGTCC TGTGGTCGGC CACTGACAAG
CACGGCACGA AATGGCAGGT CGCGGCGCTG CCGTTCGGCG GATATGTGCG ATTTCTGGGC
GATGCCAATG CGGCCTCCGC CGGGGCTGAC GGGGAGGCGA TGTCCGAGAT GGACGCGCGC
GAACGCCGCC GCTCCATGCC CGGCGCGCCG CTTTGGGCGC GCGCCGCCAC GGTCGCAGCC
GGTCCGATCT TCAACTTCAT CCTGTCGATC CTGATCTTTG CGGGCGTGGT TCTGGTCAGC
GGGCGCGCCG CAGATGAGGC GCTGGTGGGC GGGCTGATCC CTGTCCCGGA AGAGATTCTG
GTGCTGGAAG AGGGCGATCT GATCACCGGC ATCGAGGGCC AGGACGTTGA GGCCCTGGCC
GATGTCTATG AGCTTGGCCG CTCCCTCGAC CCCCAACGCA ACCTGACCTA TGACATCATC
CGCGACGGCG AGGCGATGCA GGTGGAGGCC GCGTTTCCGT TGCTGCCCAT CGTCGGCTCC
GTCACCCCGC AATCGGCGGC GATCAACGCA GGCATTGCCG AGGGCGACGT GATCATGACC
GTGGACGGCC AGCCGATCTA CGGGTTCAGC CAACTGCGCG CGGCGGTCGA TGCGTCCGAG
GGCGCGGATC TGGATCTTGT GGTCTGGCGC GCCGGAGAGT TTCTGGACCT GACCCTTGCC
CCGCGCTCCA CCGATCTGCC CACTGCGGAC GGCACGTTCG AGACGCGCTG GCTGATCGGC
ATCACGGGCG GCTTGATTTT TGAGCCGCAA ACCGTCTCCG TCAATCCGTG GGAAGCGGTG
ACCTTCGGCG CCAATCAGAC GCTGTTTATC ATCGAATCCT CGCTGTCGGG CCTGTCGCAT
ATCATCACCG GGGCGATTTC CACCTGTAAC CTGCAGGGCC CCCTTGGCAT TGCGGAGACG
TCGGGCGCGG CCGCATCACA GGGACTGGAC AACTTCATCT GGTTTATCGC GGTGCTCTCG
ACCGCCGTGG GGCTGCTGAA CCTGTTCCCG ATCCCGGTTC TGGACGGCGG GCACCTTGTC
TTTCATGCCT ATGAGGCTGT CACCGGCAAG CCACCCTCGG ACAAGGTGCT GCGCATCTTC
ATGACGGTGG GTCTGACGCT TCTGCTGTCA CTGATGCTGT TTGCGCTGAC AAATGATATC
TTCTGCCCGT AA
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| Protein sequence | MEFLPAFGNI GFTLVAFVAA LSIIVAIHEY GHYIVGRWSG IHAEVFSIGF GPVLWSATDK
HGTKWQVAAL PFGGYVRFLG DANAASAGAD GEAMSEMDAR ERRRSMPGAP LWARAATVAA
GPIFNFILSI LIFAGVVLVS GRAADEALVG GLIPVPEEIL VLEEGDLITG IEGQDVEALA
DVYELGRSLD PQRNLTYDII RDGEAMQVEA AFPLLPIVGS VTPQSAAINA GIAEGDVIMT
VDGQPIYGFS QLRAAVDASE GADLDLVVWR AGEFLDLTLA PRSTDLPTAD GTFETRWLIG
ITGGLIFEPQ TVSVNPWEAV TFGANQTLFI IESSLSGLSH IITGAISTCN LQGPLGIAET
SGAAASQGLD NFIWFIAVLS TAVGLLNLFP IPVLDGGHLV FHAYEAVTGK PPSDKVLRIF
MTVGLTLLLS LMLFALTNDI FCP
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