| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2448 |
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| Symbol | |
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| ID | 3934905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2440844 |
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| End bp | 2441998 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904806 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_510390 |
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| Protein GI | 89054939 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.753497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000620569 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACGC TGTTTCTTGT GGCCGGGGAA CCCTCTGGCG ACAGTTTGGG CGCATCACTG
ATGGACGGGT TTGATGGGAT TGGCGAGGAC GTGACCTTTG CGGGTGTCGG TGGGCCGAAG
ATGGCGTCCC GTGGCCTGCA TTCGCTGTTC CCCTATGAAG AGCTTGCGGT GATGGGCATC
GCGGAAGTGC TGCCGAAATA TCGCGCGCTG AGACGGCGGA TCACCCAGAC GGCCCAGGCC
TTTCTGGAGA GCGGCGCGGA GGCGTTGATC ACCATCGATA GCCCTGATTT CGGCCTGCGG
GTCGCGAGGA TCGTGAAGGG CGCGCGACCC GAGGCCAAGA CGATCCACTA CGTGGCCCCG
TCGGTCTGGG CCTGGCGCCC CAAGCGGGCG CAAAAGATGG CGCGCGTGAT CGACCATGTT
CTGGCGCTGC TGCCGTTCGA GCCGCCCTAC ATGGAAGCGG CGGGGATGAG CTGCGATTTC
GTGGGGCACC CCATCGCCGC GCACGCCCCC GCAGGGGAGG TTGAAACGAC TGCATGCCGC
AAGGAATTTG GGGTGGAAGA GACGGACAAC GTGATCCTCG TCCTGCCCGG CTCCCGCGTG
TCCGAGGTCA CGCGGCTTGC GCCCGTTTTC GGGGAGGCGC TCCGTGACAT CGACGCCAGG
CTGGTGCTGC CGACGACGCC GAACGTGGCG CCATTGATGG CGGATCTGAC CAAAGACTGG
TCCCCGCGTC CTATCGTTAT TGACCCACGG GAGCATAGCA CGGCCAAATT TGCGTTCCTG
AAACACGGCG CTTTCGGTGT GGCAGAGGCT GCGCTTGCAG CATCCGGGAC CGTGTCGTTG
GAACTGGCGC AGGCCCGGAC GCCCATGGTC ATCGCCTACG ACATGCACTG GCTGACGCGG
CAGATCATGC GGCTGGCCAT GCGCGTGGAC ACCGTGACCC TGGTCAATCT GGTGTCGGAG
ACGCGGGCCG TGCCGGAATT CCTTGGCCTC AATTGCCGCC CGGGACCGAT CCGGGCCGCG
TTGGATGGCA TTCGGACCGG GTCCGCGCAA GACCAAATCG CGGCGATGGC GGCCACGATG
GCGCGTCTGG GCGCAGGCGG TCCGCCGCCG GGGGAACGGG CCGCACGGTC TGTCCTCAGC
TTCCTTAACC GGTGA
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| Protein sequence | MTTLFLVAGE PSGDSLGASL MDGFDGIGED VTFAGVGGPK MASRGLHSLF PYEELAVMGI
AEVLPKYRAL RRRITQTAQA FLESGAEALI TIDSPDFGLR VARIVKGARP EAKTIHYVAP
SVWAWRPKRA QKMARVIDHV LALLPFEPPY MEAAGMSCDF VGHPIAAHAP AGEVETTACR
KEFGVEETDN VILVLPGSRV SEVTRLAPVF GEALRDIDAR LVLPTTPNVA PLMADLTKDW
SPRPIVIDPR EHSTAKFAFL KHGAFGVAEA ALAASGTVSL ELAQARTPMV IAYDMHWLTR
QIMRLAMRVD TVTLVNLVSE TRAVPEFLGL NCRPGPIRAA LDGIRTGSAQ DQIAAMAATM
ARLGAGGPPP GERAARSVLS FLNR
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