| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2447 |
|---|
| Symbol | |
|---|
| ID | 3934904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2440354 |
|---|
| End bp | 2440854 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637904805 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated protein |
|---|
| Protein accession | YP_510389 |
|---|
| Protein GI | 89054938 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.106663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000551583 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCAATTGG AATGGCAGGG GATCAGCGCA GTGTCAAAGT CGTTGAAGCG CGTAAGGCGC
GCATTGGAAG AGGCGGGCGT GGCGGTGGAC GTGTTGGAAA TGGCCGACGG GACGCGCACG
GCGGCCGATG CAGCACAGGC GGCGGGGTGC CATCTGGATC AGATCGCCAA GTCGATCATC
TTCCGGGCGG AAACGTCAGG TGAGGCTGTG TTGTTCGTGA CCGCTGGCGG CAATCTGGTG
GACGCCGCGA AGGCCAGCGC CGTCGTGGGG GAAGCGCTTG GCAAGGCTGA TGCGGGCCTG
ATCCGGCAGC AGACGGGCTT TGCCATCGGT GGCGTGTCGC CCGTGGGGCA TCTGTCGCCG
ATCCGCGCGT GGTATGACCC GCGTTTGCTG GACTTCGACG TGGTCTATGC CGCCGCAGGT
ACGCCGCGCC ATATCTTTGC GATAGATCCG ACCGTTCTGG TCGCGCTTGC GGGCGCGGCC
CCCGCAGACT TCACCGGTTA A
|
|---|
| Protein sequence | MQLEWQGISA VSKSLKRVRR ALEEAGVAVD VLEMADGTRT AADAAQAAGC HLDQIAKSII
FRAETSGEAV LFVTAGGNLV DAAKASAVVG EALGKADAGL IRQQTGFAIG GVSPVGHLSP
IRAWYDPRLL DFDVVYAAAG TPRHIFAIDP TVLVALAGAA PADFTG
|
|---|
| |