| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2444 |
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| Symbol | |
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| ID | 3934901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2436242 |
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| End bp | 2437237 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904802 |
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| Product | transcriptional regulator |
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| Protein accession | YP_510386 |
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| Protein GI | 89054935 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0668048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000772272 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGACA AAGCTGCGCG GCTGCGCCCC GGTGAAGGCC CCAAGCAATT CGTCTTCGTC
CTGCTGGACC AGTTTACGAT GCTGTGTTTC GCCTCCGCCG TGGAGGCGCT GCGCATTGCC
AACCGCATGT CGGGCCGGGA GTTGTACCGC TGGACCCTGG CGGGTGAAGG CGGCGACTAC
GCCCAAAGCT CGGCCGGGAT CTGGTTTCGC CTCGACAGCG ATCTGAGCGA GGTGACACGC
GACGACGTCG TCTTGCTGTG CGGCGGGATC GACGTGGCAA ACGCCACCAC CAAACGGCTG
CTCAGCTGGG TCCGGCGAGA GGCGCGCAAA GGCCCCGTCA TGGCCGGGCT TTGTACGGCG
GGCTATACGC TGGCCAAGGC CGGGCTTCTG GATGGCAAGC GCGCCACGAT CCATTGGGAA
AACCAGGACA GCTTCGCGGA AGAGTTTGAA GAGGTCACGC TGACCAAATC GGTCTTTGTC
GTCGATGGGC CGCGCATCAC GACCGCCGGG GGCACGGCGT CGATTGACCT GATGCTGAAG
TTGATCGCCG AGGATCACGG CGAGGATCTG GCCAATCTGG TGGCCGATCA GTTGATCTAC
ACGTCGATAA GAACGGATCA GGACACGCAG CGCCTGTCGA TCCCCACGCG CATCGGCGTG
CGCCACCCGA AGCTGGGGCA AGTGATCCGG ATGATGGAGC AGAATATCGA AGATCCCATT
AGCCCGGCGC AACTGGCGAT GGATGTGGGC ATGTCGACCC GGCAGCTGGA ACGGCTGTTC
CGCCGCTACC TCAACCGCTC CCCCAAGCGG TATTATATGG AGTTGCGGTT GGGCAAAGCG
CGCAATCTGC TGATGCAGAC GGATATGAGC GTGATCAACG TGGCACTGGC CTGCGGATTT
GCCTCGCCGT CGCATTTTTC CAAATGCTAT CGGGCCCATT ACGACACTAC ACCCTACCGC
GAGCGTGGCA GCCACGCGGC CCGCGCCAAA GTGTGA
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| Protein sequence | MSDKAARLRP GEGPKQFVFV LLDQFTMLCF ASAVEALRIA NRMSGRELYR WTLAGEGGDY
AQSSAGIWFR LDSDLSEVTR DDVVLLCGGI DVANATTKRL LSWVRREARK GPVMAGLCTA
GYTLAKAGLL DGKRATIHWE NQDSFAEEFE EVTLTKSVFV VDGPRITTAG GTASIDLMLK
LIAEDHGEDL ANLVADQLIY TSIRTDQDTQ RLSIPTRIGV RHPKLGQVIR MMEQNIEDPI
SPAQLAMDVG MSTRQLERLF RRYLNRSPKR YYMELRLGKA RNLLMQTDMS VINVALACGF
ASPSHFSKCY RAHYDTTPYR ERGSHAARAK V
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