Gene Jann_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2439 
Symbol 
ID3934896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2431617 
End bp2432135 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content64% 
IMG OID637904797 
Producttransferase hexapeptide protein 
Protein accessionYP_510381 
Protein GI89054930 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0020264 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTATG CACTCGACGG CGTCGCGCCC GACATCGAAG ACGACACATG GGTCGCGCCC 
GATGCCAATG TCATCGGCCA TGTGGTGCTG GAGACGGGCG CGAGCGTCTG GTTCGGCGCA
ACCCTGCGTG GCGACAATGA AGAGATCCGC GTTGGCGCCG GGTCCAATGT GCAGGAAAAC
GTGGTTTGTC ACACCGATCC GGGGTGCCCG CTGGTGATTG GGCCCGATTG CACGATTGGC
CATAAGGCCA TGCTGCATGG CTGCACGATT GGGGCCGGGT CACTGATCGG GATGGGGGCT
GTGGTCCTGA ACGGGGCCAG GATCGGTGCC GGGTGTCTGA TCGGCGCAGG TGCGCTGATC
CCCGAGGGCA AGGAAATCCC AGCAGGTTCG TTGGTGATTG GGATGCCGGG CAAGGTTATC
CGGGAGCTGG ACGAGGAGGC CCGCGCCGAT CTGTTGGCCT CTGCCGATCA TTACAGGCAG
AACATGCGGC GGTTCCGGGC CGGATTGCGC GCGGTCTGA
 
Protein sequence
MIYALDGVAP DIEDDTWVAP DANVIGHVVL ETGASVWFGA TLRGDNEEIR VGAGSNVQEN 
VVCHTDPGCP LVIGPDCTIG HKAMLHGCTI GAGSLIGMGA VVLNGARIGA GCLIGAGALI
PEGKEIPAGS LVIGMPGKVI RELDEEARAD LLASADHYRQ NMRRFRAGLR AV