| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2433 |
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| Symbol | |
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| ID | 3934890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2427327 |
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| End bp | 2428103 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904791 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_510375 |
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| Protein GI | 89054924 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.127939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.10084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATG CCACGCCCCC GTCAGTCACC CCAGGCGGAC AACCCGCCTT CGTTCTGGTC
CGCCCGCAGA TGGGGGAAAA CATCGGTGCG GCTGCGCGCG CGATGTGGAA CTTCGGCCTC
GACCGGATGC GCGTGGTAGA CCCCCGCGAT GGCTGGCCCA ATGAACGCGC TGTCGCGCTG
GCCAGCGGCG CCGGGCGGTT GCTGGACAAT GCGGGCCTGT ACCAGGATCT GCCCGGGGCC
TTGAGCGATT GCACCTACGT CTTTGCGACT ACGGCCCGGG ACCGGGGCCT GACCAAGCCT
ATCGTGACGC CCGAGCGCGC GATGGAGCAG ACCCGCGCGA TCTTGGCCGA GGGAGGTAAG
GTGGGCGTGC TGTTCGGGCC GGAGCGGGCG GGCCTTGAGA ACGCAGATAT CGCGCCTGCC
GATGCGATTA TATCTGTCGA TGTGAACCCG GCATTTCCAT CCTTGAATTT GGCGCAATGT
GTGCTGCTGT GTGCCTATGA GTGGCAGCGG CAGGGCTCTA CCGTCGCGCC CGAGGTCATG
GCGCTGGCCA AGACAGATTT TGCCAGCAAT CTCGAAGTAG AAAAGCTCGG CGCGCATTAC
GAGGAGCGGT TGGAGGAGGC GGGGTTCTTC TGGCCGCCCG CGAAAGCCGA CAGTATGAAA
CTGACGTTGC GCAACCTGTG GGGGCGGTTG AACCTGACGC GGGCGGACGT GCAAACCCTG
CATGGGGTGA TGCGGCAGAT GGTGCGGTGG GCCGAGGGGC GGCGCAAGGA TTTGTAA
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| Protein sequence | MSDATPPSVT PGGQPAFVLV RPQMGENIGA AARAMWNFGL DRMRVVDPRD GWPNERAVAL
ASGAGRLLDN AGLYQDLPGA LSDCTYVFAT TARDRGLTKP IVTPERAMEQ TRAILAEGGK
VGVLFGPERA GLENADIAPA DAIISVDVNP AFPSLNLAQC VLLCAYEWQR QGSTVAPEVM
ALAKTDFASN LEVEKLGAHY EERLEEAGFF WPPAKADSMK LTLRNLWGRL NLTRADVQTL
HGVMRQMVRW AEGRRKDL
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