Gene Jann_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2423 
Symbol 
ID3934880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2418957 
End bp2419799 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content56% 
IMG OID637904781 
Producthypothetical protein 
Protein accessionYP_510365 
Protein GI89054914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.546252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0962448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTA TCACCGAAGC GGCCTTGTCC GTACAATTAA TGTGGGCGGG TGCCGCGCTG 
TGTCTGGCAT GGTTCGTGCT GAGCTGTACC GTCTGGCTGT TTGATGGGCG CACCCTGTTT
GGCGAAAGCG TTTGGGCAAA ACCCATTCGA TTTTCGGCAT CACTCGCCCT GCATTACGCC
ACATTCGCAA TCGTCATTTC GTGGCTGTCA ACGGGATGGC AAACCGGCCT CACACTCACG
ATTGTTGCAT GGATTGCCGT TGGATCACTG GTCTTTCAGG TCGGATTTAT CGGCATACAA
GGTGCGCGCG GTGAGCCGTC ACACTTCAAC ACCAAGACAC CGCTGATGCG CAAACTCGAA
TTGACGATGG CTATCATGGC GGCATTGGTG ACAGCGCCCA TGGCCCTTGT TGGCGTGACC
ATCCTAGTTG ACCCGCTGGC AGATATCGCC TCGGCGGTCC GCTGGTCCAC TGGGTTGGGT
CTGATCTTTG GTACAGTCAT GACGTTCATT TCAGCCTATC ACCTGGGCAA GCGGCAAAAT
CCGTTTTTTG GTGACAAGCC GGTGACTGAG CGGCGCATCC TTGGACTGGA TTGGTCCTTG
GATCGCGGTG ATCTGCGTCC TGCGCACTTC TTTGCGACGC ATATGATGCA AGCTATGCCA
ATCGCGGGCT TGATTGCGGC TGCGTGGTTC TCTCCTCAGG TGGCTCTGAT TGCGGCCTTG
GTTGCAACAT TGATCTGGGC GTGGCTTGCA GTTGAAAGCT ACCGCCTCGC GCTGCTGGGT
CGACCAATCA ACCAACTTCT CCAACGACGT GGCTTGCCGA GCATCAGTTC AGCAACGTCC
TGA
 
Protein sequence
MTFITEAALS VQLMWAGAAL CLAWFVLSCT VWLFDGRTLF GESVWAKPIR FSASLALHYA 
TFAIVISWLS TGWQTGLTLT IVAWIAVGSL VFQVGFIGIQ GARGEPSHFN TKTPLMRKLE
LTMAIMAALV TAPMALVGVT ILVDPLADIA SAVRWSTGLG LIFGTVMTFI SAYHLGKRQN
PFFGDKPVTE RRILGLDWSL DRGDLRPAHF FATHMMQAMP IAGLIAAAWF SPQVALIAAL
VATLIWAWLA VESYRLALLG RPINQLLQRR GLPSISSATS