Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2423 |
Symbol | |
ID | 3934880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2418957 |
End bp | 2419799 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637904781 |
Product | hypothetical protein |
Protein accession | YP_510365 |
Protein GI | 89054914 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.546252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0962448 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTTTA TCACCGAAGC GGCCTTGTCC GTACAATTAA TGTGGGCGGG TGCCGCGCTG TGTCTGGCAT GGTTCGTGCT GAGCTGTACC GTCTGGCTGT TTGATGGGCG CACCCTGTTT GGCGAAAGCG TTTGGGCAAA ACCCATTCGA TTTTCGGCAT CACTCGCCCT GCATTACGCC ACATTCGCAA TCGTCATTTC GTGGCTGTCA ACGGGATGGC AAACCGGCCT CACACTCACG ATTGTTGCAT GGATTGCCGT TGGATCACTG GTCTTTCAGG TCGGATTTAT CGGCATACAA GGTGCGCGCG GTGAGCCGTC ACACTTCAAC ACCAAGACAC CGCTGATGCG CAAACTCGAA TTGACGATGG CTATCATGGC GGCATTGGTG ACAGCGCCCA TGGCCCTTGT TGGCGTGACC ATCCTAGTTG ACCCGCTGGC AGATATCGCC TCGGCGGTCC GCTGGTCCAC TGGGTTGGGT CTGATCTTTG GTACAGTCAT GACGTTCATT TCAGCCTATC ACCTGGGCAA GCGGCAAAAT CCGTTTTTTG GTGACAAGCC GGTGACTGAG CGGCGCATCC TTGGACTGGA TTGGTCCTTG GATCGCGGTG ATCTGCGTCC TGCGCACTTC TTTGCGACGC ATATGATGCA AGCTATGCCA ATCGCGGGCT TGATTGCGGC TGCGTGGTTC TCTCCTCAGG TGGCTCTGAT TGCGGCCTTG GTTGCAACAT TGATCTGGGC GTGGCTTGCA GTTGAAAGCT ACCGCCTCGC GCTGCTGGGT CGACCAATCA ACCAACTTCT CCAACGACGT GGCTTGCCGA GCATCAGTTC AGCAACGTCC TGA
|
Protein sequence | MTFITEAALS VQLMWAGAAL CLAWFVLSCT VWLFDGRTLF GESVWAKPIR FSASLALHYA TFAIVISWLS TGWQTGLTLT IVAWIAVGSL VFQVGFIGIQ GARGEPSHFN TKTPLMRKLE LTMAIMAALV TAPMALVGVT ILVDPLADIA SAVRWSTGLG LIFGTVMTFI SAYHLGKRQN PFFGDKPVTE RRILGLDWSL DRGDLRPAHF FATHMMQAMP IAGLIAAAWF SPQVALIAAL VATLIWAWLA VESYRLALLG RPINQLLQRR GLPSISSATS
|
| |