| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2417 |
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| Symbol | |
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| ID | 3934874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2415562 |
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| End bp | 2415987 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637904775 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_510359 |
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| Protein GI | 89054908 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.229432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGTAA GTTCTCGCCT TGCCGTTGCC ACTCATATCC TAACCGTCAT GGCGGTGAAG
GGGGATGTGC CTATCGGATC GGAAGACATT GCCAAGCGTG CGAGCACAAA TGCGGCTGTT
GTGCGCAAGA TCATCAGCAT GCTGGGGCGG TCGGGTATAA CGACGTCACA GACAGGCGCG
AAAGGCGGCA CGCATCTCGC GCGTGCACCA GAGCAGATCA CGCTTCTGGA CGTTTATCGC
GCCGTAGACA CGCAAGAGAT TTTTGCCAGC CCAAATTGCC CGCCTGATGC ATCCTGCCCT
ATCGGTTCGC AAATCGGTCC GGTTCTTGAT GAGGTTAAAG CCAAAGCGAC GCAGGCCATG
GAAGCCGAAC TCGCAGCCGT CTCAATAGCC GCTATTGCGG ACAAACTAAA ACCACTTCCA
GCGTAA
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| Protein sequence | MPVSSRLAVA THILTVMAVK GDVPIGSEDI AKRASTNAAV VRKIISMLGR SGITTSQTGA
KGGTHLARAP EQITLLDVYR AVDTQEIFAS PNCPPDASCP IGSQIGPVLD EVKAKATQAM
EAELAAVSIA AIADKLKPLP A
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