Gene Jann_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2413 
Symbol 
ID3934870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2413306 
End bp2413773 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content57% 
IMG OID637904771 
Producthypothetical protein 
Protein accessionYP_510355 
Protein GI89054904 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.436069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.522608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG ATCCAGAAAC CGATCTGACC TTCACCCGCA CCCTCCAAGC GCCGCGTGCC 
TTGCTGTGGG AGTGTTGGAC GACGCCTGAC CACATCAAGC ATTTCTTCGT GCCCAAGCCG
CATTCCATTG ACGATTGCGA GATCGACCTG CGGGTCGGCG GCAGGTTCAA CACGGTCATG
TCTGTCGATG GCCATCAGAT GGTCAATGAA GGCGTCTATC TTGAGGTGGA GCACGAAAAG
CGCCTGATCT TCACCGACAC CTATAGCGAG GGGTGGAAGC CCGCCGCCGA CCCGTTCATG
ACCGCGATCA TCGAGTTTGA AGATGATGGC AACGGTGGCA CGACATACAC CGCGACGGCA
CGGCATCGTT CTGTGGACGC GCGTAAATCG CATGAAGATA TGGGGTTTCT TGACGGATGG
GGCACGGTCG CGACCCAACT TGAAGACTAC GCCAACAGCC TCGGCTAA
 
Protein sequence
MKLDPETDLT FTRTLQAPRA LLWECWTTPD HIKHFFVPKP HSIDDCEIDL RVGGRFNTVM 
SVDGHQMVNE GVYLEVEHEK RLIFTDTYSE GWKPAADPFM TAIIEFEDDG NGGTTYTATA
RHRSVDARKS HEDMGFLDGW GTVATQLEDY ANSLG