Gene Jann_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2412 
Symbol 
ID3934869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2412869 
End bp2413309 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID637904770 
ProductArsR family transcriptional regulator 
Protein accessionYP_510354 
Protein GI89054903 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.589069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.516922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGTCCGT GCCGCCTGCC GCGCCGCGCG ATCACGAAAA AGTTAGGGAA ATACCTAAGT 
CTCCTTGACG GCACGACCCC GATGGCATTA CTTAGGGATA TGTCTAAGTA TGATCAGAGC
CTCGACCTGT GCTTTTCCGC GCTCGGCGAT CCGACACGCC GCCTGATCCT GCAACGCCTT
GCGCAGGGTG ATGCGAGTGT CAGTGAACTG GCGGAACCGC ACGACATGGC ACTGCCGTCT
TTCATGGAAC ACTTGAAGAA GCTGGAAGCG GCGGGCCTCG TCACGTCACG GAAGCAAGGC
CGGACGCGAA CCTGCGCGCT TGCCCCCGAT GCTTTTGCGC CCGCCAAAGA CTGGCTGCGC
GAGCAAAGCG AAATCTGGGA TGCGCGGCTC GACCGCCTGG ATGATTACGT CACCAGTCTG
ATGAAGGAAC GCAACAAATG A
 
Protein sequence
MGPCRLPRRA ITKKLGKYLS LLDGTTPMAL LRDMSKYDQS LDLCFSALGD PTRRLILQRL 
AQGDASVSEL AEPHDMALPS FMEHLKKLEA AGLVTSRKQG RTRTCALAPD AFAPAKDWLR
EQSEIWDARL DRLDDYVTSL MKERNK