| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2406 |
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| Symbol | |
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| ID | 3934863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2406947 |
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| End bp | 2407858 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904764 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_510348 |
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| Protein GI | 89054897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.362363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.524454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAT TCGTCACGCT GGCGGTCTCG TCACTTGCGC TGAGCACGTC TGCCGCCTGG
TCCGAGACCG TCGCCGTCAT CACGCCTTAT CTGTCGCAAC CCGGCACGCA GGCCTATGTC
GAGAGTTTCG AGGCCGCCGC CGCCGCAAAT GGCTGGGACG TGAACGTCAT TGATACGGCC
GGCGACGTGG CCGCCGTGAT CAGCCGCATC GAAGACGCCG TGATCCAGAC TGTCGATGCC
ATTGTGATCA ACGTCGATCC GGCGCAGGTG AATGTCGGTC TGCTGGCCGC TGCGGATGCC
GGTATCCCGG TGGTCGGCAT GGATGCGGGG TCTGATCCGC TGGTCGCGGT CAATGTCACG
TCGAACGGAT ACGGCATGGC GGCAGAGACA TCCGTCTACG TGGCCAACCG CATCAATGGG
CAGGGAAATG TCGTGATGTT CGTGTTTGAC GCGTTCCCGC CCGTGCAGCT TCGCGGCGTG
GTTGCGGATG CCGTTTTTGG CAACTTCCCC GATATCGAGG TGCTGGACCG GGTGACGCCT
GATGTCTCGG ACGGCGGGAT CGCGGACAGC CGCGCGCGCA TGGAAGCGAT CCTCGCGGCC
AACCCGGAGC CGGGCAGCAT TGCCGCCGTC TGGGCCGCCT GGGATCAGCC TGCCCTGGGC
GCACTTCAGG CGATCGAGGA TGCGGGGCGC GGCGATGAGG GGATCGTCAT CACCGGCATC
GACGCCAACC CACAGGCGCG CGATGCGATT GCAGCCGGAG GCAGTTTCGA GGCCTCCATC
GCGCAGGACT TCACCGGGAT TGGTCAGGCC GCAGCCGATG TCGTCGGGCG TTTGATGGCG
GGGGAAGAGG TGCGCGAAAG CGTCATCTAT GTGCCCACAA TGCTGGTCAC CTCCGTCAAC
GCCGCCGAAT AG
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| Protein sequence | MNKFVTLAVS SLALSTSAAW SETVAVITPY LSQPGTQAYV ESFEAAAAAN GWDVNVIDTA
GDVAAVISRI EDAVIQTVDA IVINVDPAQV NVGLLAAADA GIPVVGMDAG SDPLVAVNVT
SNGYGMAAET SVYVANRING QGNVVMFVFD AFPPVQLRGV VADAVFGNFP DIEVLDRVTP
DVSDGGIADS RARMEAILAA NPEPGSIAAV WAAWDQPALG ALQAIEDAGR GDEGIVITGI
DANPQARDAI AAGGSFEASI AQDFTGIGQA AADVVGRLMA GEEVRESVIY VPTMLVTSVN
AAE
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