Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2404 |
Symbol | |
ID | 3934861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2404422 |
End bp | 2405369 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637904762 |
Product | inner-membrane translocator |
Protein accession | YP_510346 |
Protein GI | 89054895 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.72307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAA CCCTCCGCCA ATCCGGGACG CTTCTGGGCG TCTTTGCGAT CATCGCCTTC TTCGCCATCC AGCTGCCCGA TACGTTCCTG ACACCGCGCA ACCTGATCAA CATCTCGCAG CAATTATCGA TGCTGGCCGT TGTTGCCGCG ACGATGACCT TCGTGATGGT GATGGGCGAT TTTGATCTGT CGGTCGGCTC CATGGCAAGT CTTGCGGGGA TCGTCGCCGC CACGCTGTTC GCCATGGGAT ATCCGGTCGG GGCTGGCATT AGCGTGGCCC TTCTGGTGGG CCTTGCGGGG GGGCTGTTCA ACGGGTTCCT CGTCTCGATC ATCGGCATCC TGCCGTTCGT GGCAACACTT GGCACGTTGA CCGTTTTCAG TGGCCTGGCC TTCCTGATCA GCGACGGAAG AACCATCTTT GGTCGTGATA TTCCGCCCAC ATTTTCGGGT TTTGCCCGGG GCGGGATCGA GGCGGGCAAC ATCACGCTTC CCTACCTGAC GATCACCGCG GGCATTGTCA TTCTCGTGTG CTGGTTCACG CTGGAGCAGA CGACGTTCGG CCGCAGGCTC TATGCCATCG GCGGAAACAA GGAAGCCGCA CATCTGGCCG GTATCAAAGT CAAACGCCTG CGCCTGATCG CGTTTGGACT GACCGGCTTT GGGGCGGCCT GGGCGGGATT GATGTATGCC GCCCGCGTTG CATCGGCGAA CCCGACCCAG GGCAGTGGCT TGATGCTGGA TGCCATCGCC GCCGTATTTC TTGGCATGAC CATGAGCCGC CAGGGCGAGC CGAGGGTCAT CTACACGCTC GTGGGCGTCC TGATCCTTGG CATCCTCGAC AACGGGCTGA CGCAACTTCA GGTGGACAGC TACATCCGCG AAATTCTGGT GGGCCTGATC GTGATTGCAG CCGTTGCAAC GGCCTCAATG TCCAAAAACA GGCGTTAG
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Protein sequence | MIKTLRQSGT LLGVFAIIAF FAIQLPDTFL TPRNLINISQ QLSMLAVVAA TMTFVMVMGD FDLSVGSMAS LAGIVAATLF AMGYPVGAGI SVALLVGLAG GLFNGFLVSI IGILPFVATL GTLTVFSGLA FLISDGRTIF GRDIPPTFSG FARGGIEAGN ITLPYLTITA GIVILVCWFT LEQTTFGRRL YAIGGNKEAA HLAGIKVKRL RLIAFGLTGF GAAWAGLMYA ARVASANPTQ GSGLMLDAIA AVFLGMTMSR QGEPRVIYTL VGVLILGILD NGLTQLQVDS YIREILVGLI VIAAVATASM SKNRR
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