Gene Jann_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2392 
Symbol 
ID3934849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2393424 
End bp2393981 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID637904750 
Productmethyltransferase type 12 
Protein accessionYP_510334 
Protein GI89054883 
COG category[I] Lipid transport and metabolism 
COG ID[COG3963] Phospholipid N-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.449799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCA GCGACTTCGC GCTCTTCATG GGCCAGCTTC TGCGCAAGCC CCATCAGGTT 
GTGGCGCTGG CCCCATCGTC CCGGGGTCTC TGCGCCGAGA TGGCGCGCGA GCTGGACCCC
GCCAAGGGCC CGGTTGTGGA GCTTGGGGCC GGCACGGGCA ATATCACCCA AGCGATCATG
GACGCGGGCG TCGCGCCCGA ACACTGCCAT TCCATCGAGA TGAACCCTGA ATTCTGCGAC
CGCCTGCGCG CGCGGTTTCC GGGCCTCAAC GTCTATCAGA TGAGTGCGGG CGATTGCGGC
GATCTGCCCC TGACGGGGGT GCAGGCTGTT GTGTCTGGCC TGCCGCTTTT GTCGATGCCC
CTGCCATTGC AGCGCGCTAT TCTGGGTGGG TTCACCAAAC TGGTGGCCCC GGGCGGCGAT
TACGTCCAGT TCACCTATGG GCCCAAACCA CCCGTCGCAA AGGCGGTGCG GGAAGAGTTG
AGCCTGACCT GGCGCAAGAG CGACAAGATC TGGTGGAACA TGCCGCCTGC GCGCGTCTAT
CGCTTCACGC AGGGATAA
 
Protein sequence
MASSDFALFM GQLLRKPHQV VALAPSSRGL CAEMARELDP AKGPVVELGA GTGNITQAIM 
DAGVAPEHCH SIEMNPEFCD RLRARFPGLN VYQMSAGDCG DLPLTGVQAV VSGLPLLSMP
LPLQRAILGG FTKLVAPGGD YVQFTYGPKP PVAKAVREEL SLTWRKSDKI WWNMPPARVY
RFTQG