| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2379 |
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| Symbol | dmdA |
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| ID | 3934835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2383058 |
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| End bp | 2384161 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904737 |
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| Product | putative dimethyl sulfoniopropionate demethylase |
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| Protein accession | YP_510321 |
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| Protein GI | 89054870 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.649879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.648384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGA TCTCTCCGTC CCGCCGCCTG CGCCGCACCC CCTTTTCTGA TGGGGTGGAG
GCGTCCGGGG TAAAAGCCTA CACGATCTAT AACCGGATGC TCCTGCCCAC CCTGTTTCGT
ACAGTGGAGG AGGATTACGC CCACCTGAAA TCCGCCGTGC AACTCTGGGA TGTCTCGGTG
GAGCGGCAGG TGGAGGTGCG TGGCCCCGAT GCGGGGCGTC TGGTGCAGAT GCTTACCCCC
CGCGACCTGC GCGGCATGTT GCCCGGCCAA TGCTATTACA TGCCCGTCGT GGATGAGACG
GGGGGCATGC TCAACGATCC CGTTGTCCTG AAACTGGCCG AGGACCGTTG GTGGATCTCC
ATCGCGGACA GTGATTTATT GTTGTGGGTC AAGGGGGTGG CGCAGGGCTA CCGTCTGGAC
GTATTGGTCG ATGAACCCGA TGTGTCACCC CTGGCCGTGC AGGGCCCCAA GGCCGATGAG
CTGATGGCGC GGGTCTTCGG CGACAGCATC CGCGACGTGC GCTTCTTCCG CTTCGGCTGG
TTCGACTTTC AGGGCCACGA TATGGTCATT GCGCGTTCTG GCTATTCCAA GCAGGGCGGG
TTCGAGATCT ATGTGGAGGG CTGGGATGTC GGGATGCCGC TGTGGAACGC GCTGATGGAG
GCCGGGCGCG ATCTGGATGT CCACGCCGGT TGCCCCAATA ATATCGAGCG GATTGAGGGC
GGATTGCTCA GCTACGGCAA CGACATGACC GATGACAACA CGCCCCACGA ATGCGGGTTG
GGCCGGTTCT GCAACACCGC CACCGCCGTG GGCTGTATCG GGCGCGACGC GCTGTTGCGG
GTGGCCAAGG AAGGTCCGGT GCAGCAGGTG CGCGCCATCG CGATTGATGC GGATGTCCTG
CCCAGTTGCG ACCGGGCCTG GCCGCTGATG GCGGGCAAGA AGCGCGTGGG GCAGTTGACC
TCCGCCGCCT ATAGCCCCGA CTACAGCGAA GGGGTGGCCA TCGGCATGGT GCGCATGACC
CATTGGGATC CGGGCACGCA GCTGCATGTC CAGACGCCCG ATGGCCTGAT GCCCGCAGAG
GTGCGTGAGA AATTTTGGAT TTGA
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| Protein sequence | MALISPSRRL RRTPFSDGVE ASGVKAYTIY NRMLLPTLFR TVEEDYAHLK SAVQLWDVSV
ERQVEVRGPD AGRLVQMLTP RDLRGMLPGQ CYYMPVVDET GGMLNDPVVL KLAEDRWWIS
IADSDLLLWV KGVAQGYRLD VLVDEPDVSP LAVQGPKADE LMARVFGDSI RDVRFFRFGW
FDFQGHDMVI ARSGYSKQGG FEIYVEGWDV GMPLWNALME AGRDLDVHAG CPNNIERIEG
GLLSYGNDMT DDNTPHECGL GRFCNTATAV GCIGRDALLR VAKEGPVQQV RAIAIDADVL
PSCDRAWPLM AGKKRVGQLT SAAYSPDYSE GVAIGMVRMT HWDPGTQLHV QTPDGLMPAE
VREKFWI
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