| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2372 |
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| Symbol | |
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| ID | 3934828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2377744 |
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| End bp | 2378958 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637904730 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_510314 |
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| Protein GI | 89054863 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.661778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAA TCAAAGTAGA CAACCCCATT GTCGAGATGG ACGGCGACGA GATGACCCGC
ATCATCTGGC AGTTCATCAA GGACAAGCTG ATCCTGCCCT ATCTCGACAT TGACCTGCTC
TACTACGATC TGGGCATTGA GGAGCGCGAC CGCACCGAGG ACCAGATCAC AATCGACGCG
GCCGAGAAAA CGCTTGAAGT GGGCGTTGCC GTCAAATGTG CCACCATCAC GCCCGATGAG
GCGCGGGTGG AGGAATTCGG CCTCAAGAAG ATGTGGCGCT CGCCCAACGG GACGATCCGT
AACATCCTCG GCGGGGTGAT CTTTCGCCAG CCGATCATCT GCAAAAACGT CCCCCGCCTT
GTGCCCGGCT GGACCCAGCC CATCGTCGTG GGTCGCCATG CCTTTGGCGA CCAGTATAAA
GCCACCGACA TGAAGTTCCC CGGCGCGGGC ACGCTGACGA TGAAATTCAC CGGTGAAGAC
GGCACCGAGA TCGAGCATGA GGTCTACAAG GCCGACGGCG CGGGCGTATT CATGTCGATG
TATAATATCG ACGCCTCCAT CTATGACTTC GCGCGCGCGT CGTTCAACTA TGGCCTGAAC
CTGGGCTGGC CCGTTTACCT CTCCACCAAA AATACCATTC TGAAACAATA CGATGGCCGC
TTCCTTGAGA TCTTCTCCGA AGTCTATGAG GCCGAGTTCA AGGAGGCGTT CGAGGAAAAG
AAGATCTGGT ACGAACACCG CCTCATCGAC GACATGGTCG CCTGTGCGAT CAAGTGGAAC
GGCGGCTTTG TCTGGGCCTG CAAGAATTAC GACGGTGACG TACAGTCGGA CGTTGTGGCG
CAGGGCTTTG GCTCGCTCGG GATGATGGCC AGCCAGTTGA TGACGCCCGA CGGCAAGATC
GTGGAATCGG AGGCCGCCCA CGGCACCGTC ACCCGTCACT ACCGCAATCA TCAGGAGGGG
AAGGCCACCT CCACCAACTC CATCGCCTCG ATCTATGCCT GGACCGGCGG CCTGAAGCAC
CGCGCCAAGC TGGATGACAA TGCGAAGCTG GCCGAATTCG CCGAAACGCT GGAGCGGGTG
ATCATCGAGA CCGTGGAATC CGGGTTCATG ACCAAGGACC TCGCGCTTCT GGTGGGGCCG
GATCAAAGCT GGCTGACGAC CATGGGGTTC CTGGAGAAGA TCGACGAGAA CCTCAGCAAG
GCGCTGGCGG GCTAG
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| Protein sequence | MTKIKVDNPI VEMDGDEMTR IIWQFIKDKL ILPYLDIDLL YYDLGIEERD RTEDQITIDA
AEKTLEVGVA VKCATITPDE ARVEEFGLKK MWRSPNGTIR NILGGVIFRQ PIICKNVPRL
VPGWTQPIVV GRHAFGDQYK ATDMKFPGAG TLTMKFTGED GTEIEHEVYK ADGAGVFMSM
YNIDASIYDF ARASFNYGLN LGWPVYLSTK NTILKQYDGR FLEIFSEVYE AEFKEAFEEK
KIWYEHRLID DMVACAIKWN GGFVWACKNY DGDVQSDVVA QGFGSLGMMA SQLMTPDGKI
VESEAAHGTV TRHYRNHQEG KATSTNSIAS IYAWTGGLKH RAKLDDNAKL AEFAETLERV
IIETVESGFM TKDLALLVGP DQSWLTTMGF LEKIDENLSK ALAG
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