Gene Jann_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2367 
Symbol 
ID3934823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2372160 
End bp2372813 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content60% 
IMG OID637904725 
Producthypothetical protein 
Protein accessionYP_510309 
Protein GI89054858 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.560308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.32794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGG TTATTTTCCC CGGACCAGAA GGCCGCTTGG AAGGCCGCTA CCACCCCCAA 
AAGGCCAAAG ACGCCCCCAT CGCGATCATC CTTCATCCGC ATCCCCAATT CGGCGGCACG
ATGAACAACC GTGTCGTCTA CAATCTGCAC TACGCCTATC ATCAGATGGG GTTCACGGTG
CTGCGCTTCA ATTTCCGGGG CGTGGGCCGG TCGCAGGGCG AATATGATCA GGGCATCGGC
GAGCTTTCTG ACGCGGCGTC CGCCCTCGAT TACCTTCAGT CCATGAACCC CAACTCCAAG
CATTGTTGGG TTGCGGGCTT CTCATTTGGG GCGTGGATCG GCATGCAACT TCTGATGCGG
CGGCCCGAGA TAACCGGCTT TATCTCCGTA TCGCCGCCCG CGAACATGTA TGATTTCTCG
TTCCTCGCGC CCTGCCCGGC CTCGGGCCTG ATCATCAACG GCACCTCGGA TCGCGTGGCC
AAACCACAGG ACACCCGCAT TCTCGTCGAC AAGCTGCACG AGCAGAAAGG CATCACCATC
ACCCACGAAG AGATGGAGGG GGCGGGCCAC TTCTTCGAAG ACCCCCATAT GGATCCGATG
ATCGAGAGCG TCCAAAGCTA CGTGCGCCGC CGGTTGACCG AGACGACACG GTAA
 
Protein sequence
MPEVIFPGPE GRLEGRYHPQ KAKDAPIAII LHPHPQFGGT MNNRVVYNLH YAYHQMGFTV 
LRFNFRGVGR SQGEYDQGIG ELSDAASALD YLQSMNPNSK HCWVAGFSFG AWIGMQLLMR
RPEITGFISV SPPANMYDFS FLAPCPASGL IINGTSDRVA KPQDTRILVD KLHEQKGITI
THEEMEGAGH FFEDPHMDPM IESVQSYVRR RLTETTR