| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2366 |
|---|
| Symbol | |
|---|
| ID | 3934822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2371476 |
|---|
| End bp | 2371934 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637904724 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_510308 |
|---|
| Protein GI | 89054857 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.82571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.466052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA GCACCAAAGG ACGCTACGCA ATGGTGGCGA TGGCCGATCT GGCGTTGCAG
ACCGGTGACG TGCTGACGCC GCTGTCGGAT CTGTCCAAAC GCCAGAATGT GAGCCTGCCG
TATCTGGAGC AGTTGTTCGT GAAGCTGCGC CGGGCCGAAT TGGTTGTGTC TGTCCGGGGT
CCCGGCGGGG GATACAGGCT GGCGCGGCCC GCCACCGAGA TCCGGGTTGT GGAGATTTTC
GAGGCGGTCG ACGAGACGGT CAGCGCGCTG CATATGGGGG CAGGGGCCAC CGGCGGGGGA
TCGGGCAGCC GCGCGCAGAG CCTGACCAAC CGCTTGTGGG AAGGATTTTC GGCCCATGTC
TATGTGTTCC TGCACCAGAC GCGATTGTCG GATGTGGTGA AGAATGAACT GTCGCCGTGT
CCGGCGGTGC CGAACCTTTT TGAGCTGGTC GATGAGTAG
|
|---|
| Protein sequence | MKLSTKGRYA MVAMADLALQ TGDVLTPLSD LSKRQNVSLP YLEQLFVKLR RAELVVSVRG
PGGGYRLARP ATEIRVVEIF EAVDETVSAL HMGAGATGGG SGSRAQSLTN RLWEGFSAHV
YVFLHQTRLS DVVKNELSPC PAVPNLFELV DE
|
|---|
| |