| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2351 |
|---|
| Symbol | |
|---|
| ID | 3934807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2357389 |
|---|
| End bp | 2358330 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637904709 |
|---|
| Product | homoserine O-succinyltransferase |
|---|
| Protein accession | YP_510293 |
|---|
| Protein GI | 89054842 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1897] Homoserine trans-succinylase |
|---|
| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.412479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.146068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCA AACTGCCCGA TACCCTGCCC GCCTATGACA TCCTTTCCCG CGAGGGGGTG
ATGGTGATGC CCGAGGATGG CGCTGCCAAG CAGGACATTC GCCCCCTGCG TATCGGGCTG
CTGAACCTGA TGCCCAAGAA GATCCAGACC GAGACGCAAT TCGCGCGTCT CATCGGCGCA
TCGCCTTTGC AGATCGAGCT GTCGCTGATC CGCATGTCAG ACCACGAATC CAAGAACACC
TCTGCCGCGC ATATGGACGA ATTCTACCGC ACGTTCTCGG AGGTACAGGC GACGGGCGAG
AAATTCGATG GCCTCCTGAT CACCGGCGCG CCGATTGAGC ATCTGCCGTT TGAGGACGTC
ACCTATTGGG ACGAGTTGAT CCAGGTAATG GACTGGACCC AGACCAACGT CCATTCCACC
TTCGGGATCT GCTGGGGCGG CATGGCCATG GCCTACCACT TCCACGGGAT CAAGAAACAC
ATGTTGGACG CCAAGGCGTT CGGGTGCTTC CGCCATGTGA ACCAGGCCCC GGCCTCGCCA
TATCTGCGCG GCTTCTCCGA CGACGTTCTG ATGCCCGTGT CGCGCTGGAC GGAAGTGCGC
TCGGATGAAA TCGCGGCGGC GGGTCTCTCC ACGCTGATCG GATCCGATGA CGTGGGGCCC
GCGCTGGTGG AGGATGCCGA TCACCGCGCG CTTTATGTGT TCAACCACTT TGAATACGAC
AGTGAGACGC TTAAGCAGGA ATATGACCGC GATGCCGATG CAGGCGCGCC GATCAACGTG
CCGGTGAATT ACTACCCGGG CGATGACCCC ACAGCCACGC CGATGAACCG CTGGCGATCC
CATGCGCATC TTCTCTACGG CAATTGGGTG AGTGAACTTT ACCTCACAAC CCCTTATGAT
ATCGAACAAA TCGGCCTGGC GTCCACGGAT CTGCGCAAAT GA
|
|---|
| Protein sequence | MPIKLPDTLP AYDILSREGV MVMPEDGAAK QDIRPLRIGL LNLMPKKIQT ETQFARLIGA
SPLQIELSLI RMSDHESKNT SAAHMDEFYR TFSEVQATGE KFDGLLITGA PIEHLPFEDV
TYWDELIQVM DWTQTNVHST FGICWGGMAM AYHFHGIKKH MLDAKAFGCF RHVNQAPASP
YLRGFSDDVL MPVSRWTEVR SDEIAAAGLS TLIGSDDVGP ALVEDADHRA LYVFNHFEYD
SETLKQEYDR DADAGAPINV PVNYYPGDDP TATPMNRWRS HAHLLYGNWV SELYLTTPYD
IEQIGLASTD LRK
|
|---|
| |