Gene Jann_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2345 
Symbol 
ID3934801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2351948 
End bp2352859 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID637904703 
Producthypothetical protein 
Protein accessionYP_510287 
Protein GI89054836 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.182301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.806351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CTCCGACCAC CGTGCCGGAC CTGCCCGCGT CCAACGTCCC CAAGGCAGCG 
GCTTATATGA TCGGCGCGAT CTTTGCGTTC TCCGCCATGG CGGTGGCCGG GCGCGAAGCG
ACTGTGGACC TCGATACCTT TGAGTTGATG ACCTACCGTT CCGTCGTAGG CCTTGTGCTG
GTGCTTTTGG TGGGGGGGCT TACCGGCCAC CTCCCGGAGA TCCGCACCAA CCGGATGCCC
ACCCACATCC TGCGCAACAT CTTCCACTTC ACCGGCCAGA ACCTGTGGTT TTTCGCCGTG
GGCGTGATCC CGCTGGCGCA ACTTTTCGCG TTGGAGTTCA CGTCTCCTCT GTGGGTGATG
GGCCTGGCCG CGCTGTTTCT GGGGGAGCGT CTGACACGCG TGAAGGTGGC AGCCGCGATC
ATCGGGTTCG TCGGCGTGCT GATCGTGGTG CAGCCGGGCT CTGCCCCGTT TTCCACCGGG
ATGGGGGCGG CGTTGTTGGC GGCGATCTGC TTTGCGGCGA CGGCGATTTT CACCAAACGC
CTCACCAACG ATCAATCCAC GACGTGCATC CTCTTTTGGC TGACGGTCAT CCAACTGATC
CTGGGCCTGA TCTTTTGCCT CTACGATGGA GAGATGGCTT GGCCCGACGC GGCCACACGG
CCCTGGGTCA TCCTGATCGG GTTCGCGGGC CTGATCGCGC ATTTCTGCAT GACGTCGGCC
TTTGCCCATG CGCCCGCCTC GGTCGTGATG CCGATTGATT TCGCACGCCT GCCCCTGATC
GCGGTCGTGG GGATGCTGTT TTATGGGGAG CCGTTGCTGC TTGGCGTCTT GATCGGTGCG
TTTCTGATTT TCGGGGCCAA CTACATGAAC ATCCTGGCCG AGCATCGCCG CAGCCAGCGC
GGCACCCCCT GA
 
Protein sequence
MTDTPTTVPD LPASNVPKAA AYMIGAIFAF SAMAVAGREA TVDLDTFELM TYRSVVGLVL 
VLLVGGLTGH LPEIRTNRMP THILRNIFHF TGQNLWFFAV GVIPLAQLFA LEFTSPLWVM
GLAALFLGER LTRVKVAAAI IGFVGVLIVV QPGSAPFSTG MGAALLAAIC FAATAIFTKR
LTNDQSTTCI LFWLTVIQLI LGLIFCLYDG EMAWPDAATR PWVILIGFAG LIAHFCMTSA
FAHAPASVVM PIDFARLPLI AVVGMLFYGE PLLLGVLIGA FLIFGANYMN ILAEHRRSQR
GTP