| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2341 |
|---|
| Symbol | |
|---|
| ID | 3934797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2348034 |
|---|
| End bp | 2348531 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637904699 |
|---|
| Product | flavin reductase-like, FMN-binding |
|---|
| Protein accession | YP_510283 |
|---|
| Protein GI | 89054832 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.236422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATC TGAAGGCGAC GTTTCTGGAA GGCATGAGCC GGGCCGCGGC GTCGGTTTGC
GTGGTGACGA CCGATGGCCC CGCTGGCCGG GCTGGCGTCA CCGTCTCGGC CATGACGTCG
ATCTCTGCCG ATGGGGAGGC GCCGACAATG CTGACCTGCC TGAACGCGTC GTCGTCCTGC
CTGCCGATCC TGCTGGAGAA TGCGTGCTTT TGCATCAATG TCCTCAGCAC CGGGCAGACC
GAGATTTCTG ATGTCTTTTC CTCCCGCATT CCGGCCCCGG GCGGGGACAA ATTCAACGCC
GTGGCCCACA CCGTTCTGGC CAGCGGCGCG CCCTATCTCA GCGATGCATT GGTGGGCTTT
GATTGCACGC TGGTCTCGGC TGAAAAGCTG GGGACGCACC ATATCTGCAT CGGCGCGGTT
CAGGCCGTGC GGGTTGCGCC CGAGGGGGAA CCGCTGCTGT ACGGCATGCG CAAGTACCTG
CGGGCGGAGA CCCACTGA
|
|---|
| Protein sequence | MDDLKATFLE GMSRAAASVC VVTTDGPAGR AGVTVSAMTS ISADGEAPTM LTCLNASSSC
LPILLENACF CINVLSTGQT EISDVFSSRI PAPGGDKFNA VAHTVLASGA PYLSDALVGF
DCTLVSAEKL GTHHICIGAV QAVRVAPEGE PLLYGMRKYL RAETH
|
|---|
| |