| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2332 |
|---|
| Symbol | |
|---|
| ID | 3934788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2340166 |
|---|
| End bp | 2341581 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637904690 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_510274 |
|---|
| Protein GI | 89054823 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0625849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACATCG CCACGCTGCA CCCTACCCTC GCCGCCATGA CCCAGAACGA CCTTTATGCC
GCCGGGTGCG CCGCCGCACG TGCGCCCCTG TTTCAACGCC GCATGGCTGA GCTGATCGCG
CTGCACACCG ACGCGACCCT CCCCGAGGCG CGGCCCCACC TGGACGCCTA CCTTGATCTT
GTAAGTGGCT GGCTGGAGAA AGCGGGCTTC ACGCCTGCGC GACATGAGTT GGACGGCCAC
CCGTTCCTGA TCGCCCACCG CGCGGAGGGC GATGACCTGC CCACGATCCT CAGCTATTCC
CACGGCGATG TGGTTCCGGG GATGGAGGGG CGCTGGCGCG ACGGTCTGGA TCCCTGGTCC
CTGACGGAGG TGGGGGAGGA TTGGTTCGGG CGCGGCATCG CCGACAACAA GGGGCAGTTT
CTGGTCAACC TGACGGCGCT GGACGCGGTC CTGGAGGCCC AGGGCGCGTT GGGAGCCAAT
GTCACCTGGC TGATCGAGAT GGGCGAAGAA ATCGGCTCGC CGGGGTTGGC CGAGATCTGC
AAGGCCCAGT CGACGGCATT GAAGGCCGAT ATGCTTTTGG CGTCTGACGG GCCGCGTGTG
GCCGTGGACC AGCCCACGGT GTTTCTGGGC GCACGCGGCG GAGCCACGTT CCGGCTTGAT
CTTATCCATC GGGAGGCCGG GCGGCATTCC GGCAATTTCG GCGGCGCGCT GCGCAATCCG
GCGCTGGAAC TGGCCCATGC GCTGACCTGC ATCACCGACC GCAACGGTGC GATCCAGATC
CCGGACTGGA CGCCGGGCGT GGTCCCGGAT GCCACCCGCG CCGCGCTTGC GGGGTTGACG
CCCGCAGGCG GCGCGATTGA TGCGGATTGG GGCGCCCCCG GGCTGACACC TGCGGAGCGT
ATCCATGCCT GGTCCTCGGC CGAAGTGCTG GCGATACACG CGGGCGATCC CCCCGCGCCG
GTCAACGCGA TCCCGCCCCG CGCCTCGGCC TGGGTGCAGC TGCGGTTTGC GCCCGGCACG
GATGATACGC GGCTGGAGGC TGCGCTGCGC GACCATCTGG ACGCCCACGG CTTTGCGGAT
GTCACCATCA CCCAGGAAGG TCCGTTCTTT GCCGCCAGCC AGACGCCCGT GGATCACCCC
GCCGCCCGAC TGATTGCAAA TGCCATTGCG GACGGCACCG GCACGCCGCC CGTGATCCTG
CCGGCGCTTG GCGGCTCCCT GCCCAATGAT ATCTTTTGCG AGGGGCTTGG CCTGCCGACC
ATCTGGGTGC CGCATTCCTT CCCCGGCTGC TCTCAACATG CCCCGGATGA GCATCTGCCA
AAACGCCTGC TACGCGATGC GACGGGCGTG ATGGCCGTGG CGTTGGGCGC GTTGCGGGGC
AAGACGCCCG CTGATCTGAG CGGCGACGCG CCTTAA
|
|---|
| Protein sequence | MHIATLHPTL AAMTQNDLYA AGCAAARAPL FQRRMAELIA LHTDATLPEA RPHLDAYLDL
VSGWLEKAGF TPARHELDGH PFLIAHRAEG DDLPTILSYS HGDVVPGMEG RWRDGLDPWS
LTEVGEDWFG RGIADNKGQF LVNLTALDAV LEAQGALGAN VTWLIEMGEE IGSPGLAEIC
KAQSTALKAD MLLASDGPRV AVDQPTVFLG ARGGATFRLD LIHREAGRHS GNFGGALRNP
ALELAHALTC ITDRNGAIQI PDWTPGVVPD ATRAALAGLT PAGGAIDADW GAPGLTPAER
IHAWSSAEVL AIHAGDPPAP VNAIPPRASA WVQLRFAPGT DDTRLEAALR DHLDAHGFAD
VTITQEGPFF AASQTPVDHP AARLIANAIA DGTGTPPVIL PALGGSLPND IFCEGLGLPT
IWVPHSFPGC SQHAPDEHLP KRLLRDATGV MAVALGALRG KTPADLSGDA P
|
|---|
| |