Gene Jann_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2329 
Symbol 
ID3934785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2335818 
End bp2336249 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content61% 
IMG OID637904687 
Producthypothetical protein 
Protein accessionYP_510271 
Protein GI89054820 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0727438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAA CAATCCTTCT GCCCGTCGAT CTGTCCTCGC CCGAGAGCTG GAGCAAGGCC 
CTGCCAGCGG CGAGAGATCT GATGGCAAGC GGCGAATGCG TCCTGCACGT GCTCTGCGTG
GTGCCCGATT TTGGTCTGCC CGTCGTGGGG AGTTTCTTTG ATGAGGGGTT TGAGGAAAAC
GCCATGCACC GCGTGGGCGA GGCCTTGACC GTCTGGGTCC ATGACAACAT TCCGGCAGAC
CTTAACGTGC AGCCCCATGT CACCCATGGA CGGGTCTACG ACGAAATCCT GCGGGCCGCC
GACAAGCTCA GCGCCGACGC AATCGTTATG GGGGCCCATA CGCCTGAAAT CAGCGACTAT
CTTCTGGGTC CCAACGCCGC CCGCGTGGTC CGCCACGCCA AGCAATCGGT CTTTGTGGTG
CGGGGCAAGT GA
 
Protein sequence
MFKTILLPVD LSSPESWSKA LPAARDLMAS GECVLHVLCV VPDFGLPVVG SFFDEGFEEN 
AMHRVGEALT VWVHDNIPAD LNVQPHVTHG RVYDEILRAA DKLSADAIVM GAHTPEISDY
LLGPNAARVV RHAKQSVFVV RGK