| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2301 |
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| Symbol | |
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| ID | 3934757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2306121 |
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| End bp | 2306924 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637904659 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_510243 |
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| Protein GI | 89054792 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACATC TCCGCCCCTA TCTGGAAATG ACCACGGTCG AAGACCTGTG GTCCCACCAC
ACGAAAACCC TCGCAAGTTA CGGATTTGAC CGCGTTTTCT ATGGCTTCAA CGCCTTTCGC
GGCGCGGGTC TGTATGACAA CCCCGAAGAC GCGTTGCTGC TGACCAACAT GCCCACCGAT
TATGTCGAGG CCTATGTGGA TGGTGGCATG TTCCGGGACG GCGTGATGAT GCGGTGGGCC
ACGGAAAACG TTGGCGCGGC GTCCTGGCGG GATGTCTACA TGGCGATGGC CAATGACGCC
CCGTCCAAGG GCGAACTTGC CATGCGGGCG ATGAACGAAA AGCATGATAT TACAGCGGGT
TACACGATCA GTTTCCCGAT GGCGATCAAG AACGCGAATG CAGGCATCGG CATGGCCGTC
AAGAAGGGTA TGGGCCAGGA TGAGGCCGAC GCGATCTGGC GCGAGCATGG CGAAGATATC
GAGACGATCT GCCATGTGGC GCATCTGTGC ATTCTGCAAT TGCCCGCGAC CGGCCAGCGC
AAGCTGCTGA CCCCGCGTCA GTCAGAGGTG TTGGAACTGG TGGCCGACGG CAAGACCATG
GCCGATATCG CCCTGCTGCT GGAGCGCAAT GTGGCCACGA TCGAAAAGCA CCTGCGCGGC
GCACGCGATG CGTTGGGCGT GGAGACGACA GCACAGGCGG TGCGCAAAGC CTCCATCCTC
AACCAGATCT TCCGCCTCGA TGATCGTGAC GATGTTACCC CGCGCCTGCC CCATATGGCA
GGCTCTGTGG CAGACCGCGT CTGA
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| Protein sequence | MKHLRPYLEM TTVEDLWSHH TKTLASYGFD RVFYGFNAFR GAGLYDNPED ALLLTNMPTD
YVEAYVDGGM FRDGVMMRWA TENVGAASWR DVYMAMANDA PSKGELAMRA MNEKHDITAG
YTISFPMAIK NANAGIGMAV KKGMGQDEAD AIWREHGEDI ETICHVAHLC ILQLPATGQR
KLLTPRQSEV LELVADGKTM ADIALLLERN VATIEKHLRG ARDALGVETT AQAVRKASIL
NQIFRLDDRD DVTPRLPHMA GSVADRV
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