Gene Jann_2270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2270 
Symbol 
ID3934725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2277002 
End bp2277673 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content63% 
IMG OID637904627 
Producthypothetical protein 
Protein accessionYP_510212 
Protein GI89054761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.527906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGC GGAGCCTCAT TCTTTCGGGT GGCATCCTAC ATCCCTTTGA CCAGACCTCC 
GACCTGATCG CGCAGCATCT CACATTACTA GGTATCCGGT CCGAGATTCT GCCGGTGCGC
GAAGGGCTGG CCCGCCTTGG CCAAACCTCA TTCGACCTGC TCGCCGTGAA CGCGCTGGCC
TTCACCATGA CGCAACATGA GAAATACGCC TCCCGACGCG CCACCCACTC CTTCGCAATC
TCCAAGGACG AGAAGACCGC GATCCGCAGC CACGTTCAGG CGGGCGGCAA ACTGCTTGGT
CTGCATACGG CGGCAATTTG CTTCGATGAT TGGCCGGAAT GGCGCGATCT TTTGGGCGTC
GCGTGGAAAT GGGGCGTGTC GCACCACCCG CCGCCCTGCC CCGTCCGCGT GGCCGATACG
CCGCCCTTTG ACACCGTGGA CGAACTCTAT TGCGACATGT CCGTGCACCC AGATGCCGAG
GTTCTGCTGA CGGGCACCTG CGACGGCGTG GCCGAGCCGC AGCCCATCCT GATCCGCTTC
GGCAATGCGG CCTATCTGGC CCTCGGGCAT GACAAGGACG CAGTTCAGGA TCCCGGCTAC
GTGCGGCTTC TGAAACGGGC CACCCGTGCC CTATTTCCCC CGAACAGCGA GGACGCTCAT
GCAATCGATT GA
 
Protein sequence
MSPRSLILSG GILHPFDQTS DLIAQHLTLL GIRSEILPVR EGLARLGQTS FDLLAVNALA 
FTMTQHEKYA SRRATHSFAI SKDEKTAIRS HVQAGGKLLG LHTAAICFDD WPEWRDLLGV
AWKWGVSHHP PPCPVRVADT PPFDTVDELY CDMSVHPDAE VLLTGTCDGV AEPQPILIRF
GNAAYLALGH DKDAVQDPGY VRLLKRATRA LFPPNSEDAH AID