| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2246 |
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| Symbol | |
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| ID | 3934700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2254129 |
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| End bp | 2255370 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904603 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_510188 |
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| Protein GI | 89054737 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.101865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCC TCGATGTCAT CGGCCCACAT ATGGGGCAAC CGGCCGACGT GCCAGATGTG
ATCACCGATA CCATTCGGAC CATGCGCACC CATCTGGGGA TGGAAATCGG GTATCTGTCT
GAATTTGTTG GCGATGATCT GGTGTTTCGG GCCGTTGATG CGCCGGGCCT TGAAGATCTG
GCAAAGATCG GCGATGCGCG GTCCAGGTCA GAGACCTACT GCAATCACAT CCTGTCCGGG
GCACTGCCCC AATTGATGGC CGACACTTTG GACTACCCCA TCGCCGCCGC GCTGCCGATC
ACCCAGGCCA TCCCGATCCG CGCCCATGTC AGCGTCCCGA TTGAACGCTC GGACGGGTCG
ATCTACGGCA TGTTCTGCTG CCTGTCGCCC CAACCCAACA AGACCCTCAA CGACCGCGAC
CTGCAATTGA TGCGCAGCTT CGCGCGCCTG GCGCAGTCGG AGGTGCAGCG TGAGCTGGAG
GGGAAATCCC GTCGGCAGGC CACGCTCGAT GTGATCCACA ATGTGGTGGA GCAACAAAAC
TTCAAGATCG TCTATCAGCC GATTTTCTCG CTTGAGACGG GTGACGTGTC GGGGGTGGAG
GCGCTCTGCC GGTTTGAGGC GGAACCGTAT CGCCCGCCAA ACCTCTGGTT CGACGATGCC
GCAGGCGTTG GTCTGGGCGA AATGCTGGAG GTTTGCGTGA TCGAGGCCGC GATTGCCAAC
CTGCACCTGC TGCCACCGGG GGCGTATCTG TCCCTCAATG CCAGTCCGCA AACGGTTGCG
ACGGGTCTTC TGGCCCCGAT CCTGCAGGCC TTTCCGCCGG AGGTTTTGGT CGTGGAAGTG
ACGGAGCATA TCGGCGTGTC CGACTGGGCA ACCCTGGACC GCGAATTGGA CAAGTTGCGC
GATATGGGGA TCCGGATCGC CATCGACGAT GCGGGCGCAG GTTATGCGGG CCTGCAACAT
ATGGTGCGGT TGCGGCCCGA TATCATCAAA CTGGATCGCT CACTGGTGGA CCGGGTCGAT
GAAGATCCCG CGCGCCGGTC CTTATGCGCG GCGATGGTCC ATTACGCGAC CGAGACCGGG
GCCGCCCTTG TCGCCGAAGG CATTGAACGC AAGGAAGAAG AGGACGTCCT TCGCAGCCTT
GGCGTGCATC TGGGGCAGGG GTTCCTTCTG GCCAAGCCGA TGCCTCTGGA CGCATTTCTG
GACGCGTATT GCCCGACCAA GTCGCAGGCG CATGTGAATT AA
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| Protein sequence | MSRLDVIGPH MGQPADVPDV ITDTIRTMRT HLGMEIGYLS EFVGDDLVFR AVDAPGLEDL
AKIGDARSRS ETYCNHILSG ALPQLMADTL DYPIAAALPI TQAIPIRAHV SVPIERSDGS
IYGMFCCLSP QPNKTLNDRD LQLMRSFARL AQSEVQRELE GKSRRQATLD VIHNVVEQQN
FKIVYQPIFS LETGDVSGVE ALCRFEAEPY RPPNLWFDDA AGVGLGEMLE VCVIEAAIAN
LHLLPPGAYL SLNASPQTVA TGLLAPILQA FPPEVLVVEV TEHIGVSDWA TLDRELDKLR
DMGIRIAIDD AGAGYAGLQH MVRLRPDIIK LDRSLVDRVD EDPARRSLCA AMVHYATETG
AALVAEGIER KEEEDVLRSL GVHLGQGFLL AKPMPLDAFL DAYCPTKSQA HVN
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