| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2228 |
|---|
| Symbol | |
|---|
| ID | 3934682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2234462 |
|---|
| End bp | 2235361 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637904585 |
|---|
| Product | diheme cytochrome c-type |
|---|
| Protein accession | YP_510170 |
|---|
| Protein GI | 89054719 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.546252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCCG TGATCCGTTG GATTGTGTTC CTTGGGGTCG TTGGGCTTGG GGCGGCGTGG
TTTCTCAGCC GTCCCGACCA TATCTCCGAG GCCGACATTG TGGGGCTGTC CGGCGATGCG
CAGGCCGGTG AGGCCGTCTT CTGGGCGGCT GGCTGCGCCT CATGTCACAG CCGCGAGGAC
GCGCAAGCGG AGGAGCGGCT GGTCCTGGCC GGAGGTCAGG CCTTTCCCAG CGATTTCGGC
ACCTTCCGCG CGCCCAACAT ATCCTCCGAT CCGACCCATG GCATCGGCGA CTGGACCCTG
GCGCAGTTTC TGACCGCGCT ACAAAACGGC GTCAGCCCCG ACGGCCAGCA GTACTACCCG
GCCTTCCCCT ACACCGCTTA CAGATTGGCA GATCGCCAGG ACCTCGCGGA TCTCTTTGCT
TTCATGCAAA CGCTGCCCGC CTCCGATACA CCATCCCTGC CCCATGATGT GGGCTTTCCC
TTCAACATCC GCCGCACGGT CGGCCTCTGG AACCAGATGT TCCTGCACGA TGATTTTGCG
GTGACCTTCC CCCTGTCCGA TGACGCGCCC CAGGGCCGTT ATCTGGCGGA GGCCCTGGGC
CATTGCGCCG AATGCCACAC GCCGCGCAAC GCCTTGGGGG CCTTGGATCG CAGCCGCTGG
ATGCACGGCG CCCCCAATCC ATCCGGGCGC GGCACGATCC CGGCCCTGAC ACCGGATCAG
CTGGGTTGGG CGCGACAGGA AATCGCCGCG TATCTCAACG ACGGGTTCAC ACCCGAATTT
GACACCGCCG GAGGACATAT GCGCTCGGTC ATCCAGAACC TCTCGCACCT GACAGAGGCT
GACCGCCTAG CCATTGCCAG CTATTTACTG GCGTTGCCGC CGATGTCTGG TCGCCCCTAG
|
|---|
| Protein sequence | MPPVIRWIVF LGVVGLGAAW FLSRPDHISE ADIVGLSGDA QAGEAVFWAA GCASCHSRED
AQAEERLVLA GGQAFPSDFG TFRAPNISSD PTHGIGDWTL AQFLTALQNG VSPDGQQYYP
AFPYTAYRLA DRQDLADLFA FMQTLPASDT PSLPHDVGFP FNIRRTVGLW NQMFLHDDFA
VTFPLSDDAP QGRYLAEALG HCAECHTPRN ALGALDRSRW MHGAPNPSGR GTIPALTPDQ
LGWARQEIAA YLNDGFTPEF DTAGGHMRSV IQNLSHLTEA DRLAIASYLL ALPPMSGRP
|
|---|
| |