Gene Jann_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2226 
Symbol 
ID3934680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2231911 
End bp2232858 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content61% 
IMG OID637904583 
Productlipoyl synthase 
Protein accessionYP_510168 
Protein GI89054717 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0487133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC TGAAGATCCC CGAACAACGA CACCCTGAAA AGGCTCGTCG GCCGGACAAT 
CCGCAACCCA AGAAGCCGTC CTGGATTCGC GTGAAAGCGC CGGTGGGTGA GGGATACAAG
GCCACCGCCA AGATTATGCG GGATCACAAG CTGACGACGG TCTGCGAAGA AGCCGGGTGT
CCCAATGTCG GCGAATGCTG GTCCCAGGGT CATGCGACAA TGATGATCAT GGGGGAGGTC
TGCACCCGCG CCTGCACCTT CTGCAACATC GCCACCGGCA AACCGCCCGA GGCATTGGAT
GTGTTCGAGC CGGGGCGCGT CGCCGATGCG GTGGCCAAAC TCGGCCTCAA GCATGTGGTG
ATCACGTCCG TGGATCGCGA CGATGTGGAA GATGGCGGGG CGGAGCATTT TGCCCAGACC
ATTCGCGCTG TGCGCAACCG CTCCCCGGAA ACGACGATTG AGATCCTGAC GCCCGATTTC
ATCAAATCGA CGCCCGATGC CCTGGAGGTT GTCGTGGCCG CCAAGCCCGA TGTCTTTAAC
CACAATCTGG AAACCGTGCC GGGCCTCTAC CCCGAGGTGC GTCCGGGCGC GCGCTATTTC
CATTCGCTGC GATTGTTGCA GCGGGTGAAG GACCTGGACC CGACGATTTT CACCAAATCC
GGCATCATGG TGGGCCTGGG TGAGGATCGC CAGGCGGTGT TACAGGTCAT GGACGATATG
CGTGCAGCCG ACATCGATTT CATGACGGTG GGACAGTATC TGCAACCAAC GCCGAAGCAT
CACGCCGTAG ATCGGTTCGT GACGCCCGAG GAGTTCGAGG GCTACGAGAA GGCGGCCTGG
GGCAAGGGGT TTCTGATGGT CTCGGCCACG CCGCTGACGC GATCCTCCTA TCACGCGGGC
GATGACTTCG CGCGCCTTCG GGCCAATCGG CTGGCGAAGC TCGCTTAG
 
Protein sequence
MRDLKIPEQR HPEKARRPDN PQPKKPSWIR VKAPVGEGYK ATAKIMRDHK LTTVCEEAGC 
PNVGECWSQG HATMMIMGEV CTRACTFCNI ATGKPPEALD VFEPGRVADA VAKLGLKHVV
ITSVDRDDVE DGGAEHFAQT IRAVRNRSPE TTIEILTPDF IKSTPDALEV VVAAKPDVFN
HNLETVPGLY PEVRPGARYF HSLRLLQRVK DLDPTIFTKS GIMVGLGEDR QAVLQVMDDM
RAADIDFMTV GQYLQPTPKH HAVDRFVTPE EFEGYEKAAW GKGFLMVSAT PLTRSSYHAG
DDFARLRANR LAKLA