Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2226 |
Symbol | |
ID | 3934680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2231911 |
End bp | 2232858 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637904583 |
Product | lipoyl synthase |
Protein accession | YP_510168 |
Protein GI | 89054717 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0487133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGATC TGAAGATCCC CGAACAACGA CACCCTGAAA AGGCTCGTCG GCCGGACAAT CCGCAACCCA AGAAGCCGTC CTGGATTCGC GTGAAAGCGC CGGTGGGTGA GGGATACAAG GCCACCGCCA AGATTATGCG GGATCACAAG CTGACGACGG TCTGCGAAGA AGCCGGGTGT CCCAATGTCG GCGAATGCTG GTCCCAGGGT CATGCGACAA TGATGATCAT GGGGGAGGTC TGCACCCGCG CCTGCACCTT CTGCAACATC GCCACCGGCA AACCGCCCGA GGCATTGGAT GTGTTCGAGC CGGGGCGCGT CGCCGATGCG GTGGCCAAAC TCGGCCTCAA GCATGTGGTG ATCACGTCCG TGGATCGCGA CGATGTGGAA GATGGCGGGG CGGAGCATTT TGCCCAGACC ATTCGCGCTG TGCGCAACCG CTCCCCGGAA ACGACGATTG AGATCCTGAC GCCCGATTTC ATCAAATCGA CGCCCGATGC CCTGGAGGTT GTCGTGGCCG CCAAGCCCGA TGTCTTTAAC CACAATCTGG AAACCGTGCC GGGCCTCTAC CCCGAGGTGC GTCCGGGCGC GCGCTATTTC CATTCGCTGC GATTGTTGCA GCGGGTGAAG GACCTGGACC CGACGATTTT CACCAAATCC GGCATCATGG TGGGCCTGGG TGAGGATCGC CAGGCGGTGT TACAGGTCAT GGACGATATG CGTGCAGCCG ACATCGATTT CATGACGGTG GGACAGTATC TGCAACCAAC GCCGAAGCAT CACGCCGTAG ATCGGTTCGT GACGCCCGAG GAGTTCGAGG GCTACGAGAA GGCGGCCTGG GGCAAGGGGT TTCTGATGGT CTCGGCCACG CCGCTGACGC GATCCTCCTA TCACGCGGGC GATGACTTCG CGCGCCTTCG GGCCAATCGG CTGGCGAAGC TCGCTTAG
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Protein sequence | MRDLKIPEQR HPEKARRPDN PQPKKPSWIR VKAPVGEGYK ATAKIMRDHK LTTVCEEAGC PNVGECWSQG HATMMIMGEV CTRACTFCNI ATGKPPEALD VFEPGRVADA VAKLGLKHVV ITSVDRDDVE DGGAEHFAQT IRAVRNRSPE TTIEILTPDF IKSTPDALEV VVAAKPDVFN HNLETVPGLY PEVRPGARYF HSLRLLQRVK DLDPTIFTKS GIMVGLGEDR QAVLQVMDDM RAADIDFMTV GQYLQPTPKH HAVDRFVTPE EFEGYEKAAW GKGFLMVSAT PLTRSSYHAG DDFARLRANR LAKLA
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