| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2216 |
|---|
| Symbol | |
|---|
| ID | 3934670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2222694 |
|---|
| End bp | 2223185 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637904573 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_510158 |
|---|
| Protein GI | 89054707 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3753] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTC GTGGACCATC CCTCACAGCC CTTCTTGGCC TGCTGGCCGT CGCAGGTTAC
CAGAACCGGG ATCGCATCAG CGAAATGCTC GGCGATGCCC GACGCAACAT GCAGGGCCCG
ACCTCAGAAA CGGACAACCG GCCCCAAAGC GGCCCGACAT CGTTCCTGTC CGAAATTTCG
TCGATGTTCA CGGGGGCTGC CGCCGGTCGG TCGCTGCAAT CCGGGTTGGG GGAGCTGTTT
GACAGTTTCC GCTCATCCGG TCGCGGGGAC GTCGCGGATA CCTGGATGGG GCACAGTGAC
AGCCAACCGA TTGACGCGCG CGATCTGGAA GACACGATCG GGCAGGAGAC GCTGGACCAC
TTGTCTGACC GCACCGGATT GTCGCGCGAG GAATTGTTGT CGCGGCTCTC AGACAGCTTG
CCGCACACCG TCAATCGCTT CACGCCGGAT GGACGCATAC CGAACGATGA TGAGATCGCG
CGCGCGATTT AA
|
|---|
| Protein sequence | MARRGPSLTA LLGLLAVAGY QNRDRISEML GDARRNMQGP TSETDNRPQS GPTSFLSEIS
SMFTGAAAGR SLQSGLGELF DSFRSSGRGD VADTWMGHSD SQPIDARDLE DTIGQETLDH
LSDRTGLSRE ELLSRLSDSL PHTVNRFTPD GRIPNDDEIA RAI
|
|---|
| |