| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2193 |
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| Symbol | |
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| ID | 3934647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2198399 |
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| End bp | 2199964 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637904550 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_510135 |
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| Protein GI | 89054684 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.81786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTG CGGCGATGTT CGGGTCCAGT TCGGGCGCGG TCGGGGCGAC GGCTGTCGGT
GCGGTCGCGC TGGTTGCGGG CGCGATTGGC TTCACCGTCT TCAACGGGTC CGGTGCCCCC
CTTCAAGATC AACCTGTTGC GCTCGTTGTC GCTGACGGAG CCTTGGCTGA TCCGGCCATG
GAGGCCGCGG GCACGGCAAC ATTACCCGAT CCTGTGCCCG GCATTGAGCC GCCCCGCCTT
GACCTCGTGC GCGTCGAGGC CGGGGGTGAG ACGGTGATCG CCGGGCAGAC CTCTCCCGAT
ATCACGGTCG TGATCCTTCT GGACGGCCTG CAATTTGCAG TGACCCGGTC CGATGGGGCA
GGGGATTTCG TGTCCCTCGT GACCCTTCCT CCCTCGCCGA TGCCCCGCGC CCTCAGCGTG
GAGGCCTGGC CCGAGAATGC CCCCGTGCTG GCCGGTCTGG AGACGGTCTT TATCGCGCCT
GTCACCGGCC CGGGGGCGCA GCCTTCGGCC ACGGCAGGGG GGCCGGGCGG CGGTGAGGTT
GCGGCCCTCG ATCCGTCCAC GATCATGGAT CCTGACGGGC CACAGGGCGT TGCTGCCGAC
AGCGGGGCCG GGGCCGGGGA CATCGCCCCG GTAGATGGAG TCGAAATCGG CGCTGTCCCC
GATGAGGAGC AGGTCGCCCT GGTGGTCCCC GCCGTTGAGG CGTTGCCTGC CGCGACGCCA
TCCGCAGGCC CGGCTGACAC GGCGCCGGAC GCCCCGCTGG ATGGGGCCAC ACAAGCCCCG
TCTGTCGTCG GGGATGCATC CCCACCCGCA GCCGGTGCGG AGGAGACAGT TGAGATCGCA
TCCCTCCAGC CAGGTGATGA CGCGCCCACG CCTGCATCAA CGGGGAGCGG CCCCGGCGTA
GCGTCCTCTG GCCCGGGATC ATTGACGACG CCCACCCTCT CTGCCGCCCC GGCGGCCGCC
CCCCCCGCAT CCACGGGAGA CGGCACGCCG CGCCCGGCCC GTGCCGCCGC GCCGGCAGTT
GTCATCGCCG GACCCGAGGG GGTGCGCGTG GTGCAGGGAC CCACGCCAGA GCCCGAGGTG
CAGACCAGCG TCCGGCTTGA CGCGATTTCC TACGACGCGG AGGGGCAGGT CATCCTGGCG
GGCCGCGGCC CTGTTGCGGC GGATATTCAG GTCTATCTCA ACAATCAGCC CATCCAGTTG
GGCGAGATCG GGCCGGGCGG CGCGTGGTCG CTGCAACTGC CCGATGTGGA TCCGGGCACA
TACACGCTCG CGGTGGCGGA ACTGGCCGAG GACGGCTCCA CCACCAGCCG GGTTGAGACA
CCGTTTCTGC GAGAAGACCC GGACCGGGTC GCCGAGGCGC CGGTGGCGCA GGCCGCAGGC
ATTGACGTGA TCACCGTGCA GCCCGGATTT ACGTTATGGG GCATCGCGCA GGACATGTTT
GGCGATGGCA TCCTCTATGT GCAGATCTTT GACGAGAACC AGGACCAGAT CCGCGATCCG
AACTGGATTT TTCCCGGGCA GATCTTTCGC CTGCCTGACG TCGAGCAAAG CAATCGCGAG
AACTGA
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| Protein sequence | MKLAAMFGSS SGAVGATAVG AVALVAGAIG FTVFNGSGAP LQDQPVALVV ADGALADPAM
EAAGTATLPD PVPGIEPPRL DLVRVEAGGE TVIAGQTSPD ITVVILLDGL QFAVTRSDGA
GDFVSLVTLP PSPMPRALSV EAWPENAPVL AGLETVFIAP VTGPGAQPSA TAGGPGGGEV
AALDPSTIMD PDGPQGVAAD SGAGAGDIAP VDGVEIGAVP DEEQVALVVP AVEALPAATP
SAGPADTAPD APLDGATQAP SVVGDASPPA AGAEETVEIA SLQPGDDAPT PASTGSGPGV
ASSGPGSLTT PTLSAAPAAA PPASTGDGTP RPARAAAPAV VIAGPEGVRV VQGPTPEPEV
QTSVRLDAIS YDAEGQVILA GRGPVAADIQ VYLNNQPIQL GEIGPGGAWS LQLPDVDPGT
YTLAVAELAE DGSTTSRVET PFLREDPDRV AEAPVAQAAG IDVITVQPGF TLWGIAQDMF
GDGILYVQIF DENQDQIRDP NWIFPGQIFR LPDVEQSNRE N
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