| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2186 |
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| Symbol | |
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| ID | 3934640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2191793 |
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| End bp | 2194822 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904543 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_510128 |
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| Protein GI | 89054677 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC GTCTGAAACC TCAAGCCGCG TCCAAATGGG GGCGTCTGAT CGACCGTGAC
ACATCGGTGA AATTCACCTT CAACGGCAAG TGGATGCGCG GCCATGAGGG CGATACGTTG
GCCTCGGCGC TTCTGGCCAA TGGTCAGATG CTGGTGGGCC GCTCGTTCAA GTATCACCGC
CCGCGCGGGA TCATGTCCTC AGGCGCGGAG GAGCCCAACG CGCTGGTCAA TCTCGGCTCC
GGCGTCACCC ATGAGCCGAA CCAGCGCGCC ACCACCACCG AGCTGTTTGA GCGGTTGGAG
GCCAGGTCCC AGAACCACTG GCCGTCATTG GCCTATGACA TCGGGGCCGT GAACCAATTG
GTCTCCCGGT TCCTGCCTGC GGGCTTTTAT TACAAGACAT TCCTGTTCCC GCGGGCGGCG
TGGAAACATG TGTTCGAGCC GTTCATCCGC CAATCGGCGG GCCTTGGCCA AGCGCCGCAT
CCCGAAACGC GCGACCCGGA CACCTACGAG CACTTTTATG CCCATGTCGA TCTGGTTGTC
GCGGGCGGTG GCATTGCAGG GTTGCAGGCC GCGCTGCTCG CGGGCCGTGC CGGGGCCAGC
GTTCTGTTGA TGGAGCAGAC GGCCCATTGG GGCGGGCGGG CCCCTGTGGA TGGCGTTGAA
GTTGACGGTG TACCGGCTGA GGATTGGGTG AAAGACGCCG TACAAACCCT TGAGGCGATG
GAGAATGTGA CGATCCGGAC CCGCGCGATG GTGGCCGGCG TCTATGACCA TGGCTATGTG
CTGGGATATG AACGGCTGAC GGATCACGCA CCGGATCAGG ATGGGCCGCG CCACCGTCTC
TGGCGCATTC GGGCGCGGCG GATCATTTCG GCGACCGGTG CGCTGGAGCG TCCGCTCAGC
TTTTCCGGCA ACGACAAGCC GGGGGTCATG CTGGCCTCGG CCATGCGCGA CTATCTGGTG
AATTACGGCG TGGCGGTCGG CGAGAACATC GTTGTTGTGA CCAACAACGA TGACGGCTAC
CGCACGGCGA TTGCACAGGT GGAGGCCGGA TTGTCCGTCG CCTGCGTGGT CGATGCCCGA
CCAAGTGCGA CCGGCGAATT ACCGAACAAA GCCCGTGCCT TGGGGATCAA TGTTAAAGTA
AACTGCGCCG TTGCCGGTGT GAAAGGCCTG CGCAATGTTG TGTCAGTGTC GCTATGCCCC
CAGGATGGAG ATGGTTTAAC CGTTGAACAA ATTCCCTGTG ATGCGGTGGC GATGGCAGGC
GGCTGGTCTC CGGTCGTGCA TCTCTGGTCC CATTGCGGCG GCAAATTGAC ATGGGATGAG
GGCGCGTCGT TCTTCCGCCC CGACCATGAC CGCCCACCGC TTGATCAGAA TGGGGATGGT
TTCGTGACCT GCGTCGGCAG CGCAGACGGA GCGATGTTGG CGAGCGAAAC CTTAACAAAC
ACTTTAATAA ACATCGACAA TGCGCTGAAA AGTATTGATT TACTCGCCGC TGACGGAGCA
ACGGCGAGGA GCGACAGGGA GGAGCCGCTG GCCCCGGTCT GGGTCATGCC GAAGGCGGCG
GACTACAAGA AGCGCTCGAA GATGTGGCTC GATTTCCAGA ACGACGTGAA AGTGTCCGAC
GTCCAGCTCG CGGCCCGGGA GGGATATGAG AGCGTCGAGC ACACCAAGCG CTACACGACC
CTCGGCATGG CGACCGATCA GGGGAAGCTG AGCAACATCA ACGGATTGGC CGTCCTTGCT
GATGCACTGA ATGAAAGCAT CCCGCGCGTC GGCACGACCA CATTCCGCCC GCCTTACACA
CCCATTTCCA TGGGGGCCAT TGCCGGTGAG GCGAGCCGCG AGATCTTCCA ACCCCTCCGC
CGCACCCCGA TGCATGACTG GCACGAGGCC CAGGGCGCGT ATATGGAGCC CGTGGGCGGC
TGGCGCAGGC CCTATTGCTT CCCGCAAGCT GGCGAGACCC ATGAGCAGGC CGTGAACCGG
GAGATCGACG CCACGCGCGG CTCGCTCGGT CTGCTGGACG CCTCCACCCT CGGCAAGATC
ATCGTCAAAG GCCCCGATGC GCCGAAATTC ATGGATATGC TCTACACCAA CATGATGAGC
AGCCTGAAAC CGGGCAAATG TCGCTATGGC CTGATGTGCT CTGAGAATGG CTTCCTGATG
GATGACGGCG TGGTCGTCCG GCTGGATGAG GACACGTTCC TGGCCCACAC GACCTCGGGC
GGGGCCGATC ACGTCCATGC TCATATGGAG GATTGGCTGC AATGCGAGTG GTGGGACTGG
AAGGTCCACA CCGTCAACGT GACCGAGCAA TGGGCGCAGG TCGCCGTTGT GGGCCCCAAC
GCACGCAAAC TGCTGGACAA ACTGGGGGCG GATTTTAACC TGTCTGCCGA CGCACTGCCC
TTCATGGGGA TGGCGGAGGG TAAGATTGGC GGCTTTGATG CGCGTGTTTT CCGCATCTCC
TTCTCAGGCG AGTTGTCCTA CGAGATTGCC GTTCCCGCCT CCCAAGGCAT AGCATTCTGG
GAGGCGTTGC ATGCGGCGGG CGCGGAATGG GACGCGACGC CCTACGGCAC AGAAGCGCTT
CACGTGATGC GCGCTGAGAA GGGCTTTATC ATGATCGGGG ACGAGACGGA CGGCACCGTC
ATCCCGCAGG ACCTTGGCCT CAACTGGGCG ATCTCCAAGA AGAAAGAGGA TTTTTTGGGC
AAACGCGGGC AGGAGCGGAC GTATATGGTC GACCCCAACC GCTGGAAGCT GGTGGGGCTG
GAGACAGCCG ACAAATCCGT GCTGCCCGAC GGCAGTTACG CCGTGGCCAA GGGCACAAAC
GCAAACGGAC AGGCGAATGT GGAGGGGCGC GTGACGTCGA CCTATTATTC GCCGACTGTC
AAACGCGGCA TTGCCATGGG GCTGGTCCTG AACGGGCCGG ACCGGATGGG AGAGACTGTT
CAGTTCAACA AGGTGGATGG ATCGACTGTG GCCGCCAAAA TCGTGAACCC GGTGTTCTTT
GACCCGGACG GGGAGAAGCA GAATGTCTGA
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| Protein sequence | MSTRLKPQAA SKWGRLIDRD TSVKFTFNGK WMRGHEGDTL ASALLANGQM LVGRSFKYHR
PRGIMSSGAE EPNALVNLGS GVTHEPNQRA TTTELFERLE ARSQNHWPSL AYDIGAVNQL
VSRFLPAGFY YKTFLFPRAA WKHVFEPFIR QSAGLGQAPH PETRDPDTYE HFYAHVDLVV
AGGGIAGLQA ALLAGRAGAS VLLMEQTAHW GGRAPVDGVE VDGVPAEDWV KDAVQTLEAM
ENVTIRTRAM VAGVYDHGYV LGYERLTDHA PDQDGPRHRL WRIRARRIIS ATGALERPLS
FSGNDKPGVM LASAMRDYLV NYGVAVGENI VVVTNNDDGY RTAIAQVEAG LSVACVVDAR
PSATGELPNK ARALGINVKV NCAVAGVKGL RNVVSVSLCP QDGDGLTVEQ IPCDAVAMAG
GWSPVVHLWS HCGGKLTWDE GASFFRPDHD RPPLDQNGDG FVTCVGSADG AMLASETLTN
TLINIDNALK SIDLLAADGA TARSDREEPL APVWVMPKAA DYKKRSKMWL DFQNDVKVSD
VQLAAREGYE SVEHTKRYTT LGMATDQGKL SNINGLAVLA DALNESIPRV GTTTFRPPYT
PISMGAIAGE ASREIFQPLR RTPMHDWHEA QGAYMEPVGG WRRPYCFPQA GETHEQAVNR
EIDATRGSLG LLDASTLGKI IVKGPDAPKF MDMLYTNMMS SLKPGKCRYG LMCSENGFLM
DDGVVVRLDE DTFLAHTTSG GADHVHAHME DWLQCEWWDW KVHTVNVTEQ WAQVAVVGPN
ARKLLDKLGA DFNLSADALP FMGMAEGKIG GFDARVFRIS FSGELSYEIA VPASQGIAFW
EALHAAGAEW DATPYGTEAL HVMRAEKGFI MIGDETDGTV IPQDLGLNWA ISKKKEDFLG
KRGQERTYMV DPNRWKLVGL ETADKSVLPD GSYAVAKGTN ANGQANVEGR VTSTYYSPTV
KRGIAMGLVL NGPDRMGETV QFNKVDGSTV AAKIVNPVFF DPDGEKQNV
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