| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2183 |
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| Symbol | |
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| ID | 3934637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2189432 |
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| End bp | 2190676 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904540 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_510125 |
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| Protein GI | 89054674 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.409819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAT ATTCTGCCTT TGCCATCGCC CGCGAAGCCT TCCGCCACCA TGACGGGTGG
GAACGGGCGT GGCGGTCCCC GACGCCCAAG GCCAGCTATG ACGTGATCAT TGTGGGCGCA
GGCGGGCACG GGTTGGCCAC GGCCTATTAT CTGGGCAAGA ACCACGGCAT CACCAATGTC
GCGGTGATCG AGAAGGGGTG GCTTGGCGGC GGCAACACCG GGCGCAACAC GACGATTATC
CGGTCGAACT ACCTGCAGGA CCCGTCTGCC GCGATCTACG AAAAAGCGCG GTCTTTGTAT
GAAACCCTGT CCCAGGACCT GAACTACAAC ATCATGTTCA GCCCGCGCGG TGTCATCATG
CTGGCCCAGA CCCACCATGA GGTGCGAGGC TATCTGCGCA CGGCCCAGGC CAACGCGCTG
CAAGGGGTCG CGACGCGGTT TATCGACAAG CATGAGGTCA AGCGGCTCGT GCCGATCATG
AATATCGAGG GCCCGCGCTA TCCGGTTCTG GGCGGGCTGT GGCAGGCGCG CGGCGGCACG
GCGCGCCATG ACGCGGTGGC CTGGGGCTAT GCGCGGGCGT GTTCCGACAT GGGCATGGAC
ATCATCCAGC AGACCGAAGT CACTGGCGTG CGGGTCGAGG GTGGCGCGGT GAAGGGCGTC
GAGACGTCCA AGGGGTTCAT CGGATGCAAG AAACTGGGCG GCGTGGTCGC CGGGCATTCA
AGCGTATTGG CCGAGATGGC CGGCTTCCGT CTGCCGATGG AAAGCGTTGC GTTGCAGGCG
CTGGTGTCCG AGCCGATCAA GCCCTGCATG GACGTGGTCG TCATGGCCAA TACGGTCCAC
GGCTACCTCA GCCAGTCCGA CAAGGGTGAG ATGGTCATTG GCGGCGGCAC TGACGGCTAC
AACAATTACA CCCAGCGCGG GTCCTTCCAT CACGTGGAGG AAACCGTGCG CGCGTTGATC
GAGACCTTCC CGATGCTGTC GCGCCTGAAA ATGCTGCGCC AATGGGGCGG GATCGTGGAT
GTGACGGGCG ACCGCTCTCC GATCCTGTCG AAAACGCCTG TGGACGGCAT GTTCATGAAT
TGCGGCTGGG GCACGGGCGG GTTCAAGGCG ATCCCGGGCT CTGGCTGGGG CTTTGCGGAG
CTGATGGCGA CGGGGCATTC GCCGCTGACG GCGGAGTTCG GGATGGAGCG GTTCCGCGAA
GGGCGGTTCA TTGACGAATC TGTCGCCGCC GGGGTGGCCC ATTGA
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| Protein sequence | MRKYSAFAIA REAFRHHDGW ERAWRSPTPK ASYDVIIVGA GGHGLATAYY LGKNHGITNV
AVIEKGWLGG GNTGRNTTII RSNYLQDPSA AIYEKARSLY ETLSQDLNYN IMFSPRGVIM
LAQTHHEVRG YLRTAQANAL QGVATRFIDK HEVKRLVPIM NIEGPRYPVL GGLWQARGGT
ARHDAVAWGY ARACSDMGMD IIQQTEVTGV RVEGGAVKGV ETSKGFIGCK KLGGVVAGHS
SVLAEMAGFR LPMESVALQA LVSEPIKPCM DVVVMANTVH GYLSQSDKGE MVIGGGTDGY
NNYTQRGSFH HVEETVRALI ETFPMLSRLK MLRQWGGIVD VTGDRSPILS KTPVDGMFMN
CGWGTGGFKA IPGSGWGFAE LMATGHSPLT AEFGMERFRE GRFIDESVAA GVAH
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