| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2182 |
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| Symbol | |
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| ID | 3934636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2188009 |
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| End bp | 2189229 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637904539 |
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| Product | cytochrome c-type biogenesis protein CycH |
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| Protein accession | YP_510124 |
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| Protein GI | 89054673 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.999893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTTT GGATTGCAGC GGGCTTCATT TGCGTGGTCG TCGCGGGCGT CGTGTTTCTG
GCCGCCCGCC GCCCCGGAGA CGTGCAGGCG CCCGCCGCCG CCTATGACCT ACGGGTCTAC
CGCGACCAAT TGGCCGAGCT GGACCGCGAC GTGACCCGCG GCACCCTGTC GGAGGAGGAG
GCGACCCGCG CCCGCACCGA GGTCAGTCGC CGCATTCTGG ACGCCGACCG CGCGTTGCAA
GAGGTGCAGC GCAGCGATGG CGCGTCCCGC CTTGGCACGG CTGTCGTGGG TTTGGGCCTT
GTGGCCACGG TCGCGGGCGC TGTTTTCGTC TACGGCCAGA TCGGCGCGCC CGGCTATCCG
GACCTGCCCA TTGGCCAGCG CATCGCGATG ATTGAAGAGG CGCGCGACAA CCGCCCCTCC
CAGGACCTGG CTGAGGAGCA GGTGCCGGAC CGCCCGGCCC CCAACGCCGA CCCGGAGCGC
GCGGCGATGG TCGCGCAGCT GCGCACCGTG ATGGAACAGC GCCCCGACGA CACCGAAGGC
CTGACCCTTC TGGCCGCGAA TGAGGCGATG TTGGGTAACT TCCGCGCCGC CCACCGGGCG
CAGACACGGC TGATTGGCCT TCTGGAAAAC GACGTCACAG GCCGCCATTA CATCGATCTG
GCCGAGATGA TGATTTTCGC CGCCGGTGGC TATGTCTCGC CCGAGGCGGA AGAGGCCCTG
CGCATCGGTC TTCAGATGGA GCCGCGCGAC GGCACAGGCC GCTATTATGC CGGTGAAATG
TATGCCCAAC AGGGACGCCC GGACCTCGCG GTGCCGATCT GGACGGCTCT GTTGACCGAG
TCGAACCCCG ATGCGCCATG GGTGCAGCCG ATCCGCCAGC AATTGGGCGA CGTGGCCTTC
GCCGCGGGCG TGGAGGTTGA CCCCTCGCTT CTCGCCGCGC CGCGTGGTCC CTCGATGGCC
GATATGGACG GGTTGGCCCC GGAAGATCAG CAGGCGATGA TTGAGACAAT GGTCAATGGC
CTGGCCGACC GGCTGGCCAC GGAAGGCGGA CCGCCCCAGG ACTGGGCGCA GCTGATCACC
GCCTATGGCG TGTTGGGTCG CACGAACGCC GCGCAGATCG TCCATGACGA CGCCCAAACC
GTGTTCGCCG ACGTGCCCGA GGCGCTGGAT ATGATTGACG AGGCTTTCCG CGCGGCAATG
GCCCGGATTG GCGAGCAATG A
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| Protein sequence | MAFWIAAGFI CVVVAGVVFL AARRPGDVQA PAAAYDLRVY RDQLAELDRD VTRGTLSEEE
ATRARTEVSR RILDADRALQ EVQRSDGASR LGTAVVGLGL VATVAGAVFV YGQIGAPGYP
DLPIGQRIAM IEEARDNRPS QDLAEEQVPD RPAPNADPER AAMVAQLRTV MEQRPDDTEG
LTLLAANEAM LGNFRAAHRA QTRLIGLLEN DVTGRHYIDL AEMMIFAAGG YVSPEAEEAL
RIGLQMEPRD GTGRYYAGEM YAQQGRPDLA VPIWTALLTE SNPDAPWVQP IRQQLGDVAF
AAGVEVDPSL LAAPRGPSMA DMDGLAPEDQ QAMIETMVNG LADRLATEGG PPQDWAQLIT
AYGVLGRTNA AQIVHDDAQT VFADVPEALD MIDEAFRAAM ARIGEQ
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