Gene Jann_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2173 
Symbol 
ID3934627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2177892 
End bp2180051 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content63% 
IMG OID637904530 
Productphosphoribosylformylglycinamidine synthase II 
Protein accessionYP_510115 
Protein GI89054664 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01736] phosphoribosylformylglycinamidine synthase II 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CGACCATTAC AGACGATATC ATCAAGGCCC ATGGCTTCAC CGACGATGAA 
TATGCCGAGG TGAACAAGAT CCTCGGACGT GCGCCGAATT ATACCGAGAT GGGCATTTTC
TCTGCCATGT GGAACGAGCA TTGTTCCTAC AAGTCCTCCA AGAAATGGCT GCGGACCCTG
CCCACCGAAG GCCCACAGGT CATTTGCGGC CCCGGGGAAA ACGCAGGCAT CGTCGATATC
GGTGATGGCC AATGCGTGGT CTTCAAGATG GAAAGCCACA ACCACCCCTC TTACATCGAG
CCCTACCAGG GGGCTGCCAC CGGCGTGGGC GGCATTCTGC GCGACGTCTT CACCATGGGC
GCGCGGCCGA TTGCGGCGAT GAATTCGCTC AGCTTCGGAG AGGTCGCGCA CCCCAAAACC
CGGCAGCTGG TCCACGGCGT GGTCGAGGGC GTCGGCGGTT ACGGCAATTG CTTCGGCGTG
CCGACCATTG GCGGCGAAGT CCGGTTCCAC CCCGCCTATA ACGGCAATTG TCTGGTCAAT
GCGTTTGCCG CAGGCCTCGC GGACACCGAC AAGATCTTCT ATTCTGCGGC CTCCGGCGTC
GGCATGCCCG TCGTCTATCT GGGCGCCAAG ACGGGCCGCG ATGGCGTGGG CGGGGCCACC
ATGGCCTCCG CTGAATTTGA CGACACGATC GAAGAAAAAC GCCCCACCGT GCAGGTCGGT
GACCCGTTCA CCGAAAAGCG CCTTTTGGAG GCGACGCTGG AACTGATGGC CTCTGGCGCC
GTGATTTCCA TTCAGGATAT GGGGGCCGCT GGCCTGACGT GTTCCGCCGT TGAGATGGGC
GACAAGGGCG GGCTTGGCAT CCGCCTGAAC CTTGACGCCG TGCCGATCCG CGAAGACGCG
ATGACCGCCT ATGAGATGAT GCTGTCGGAA AGCCAGGAAC GGATGCTGAT GGTCCTCAAG
CCCGAGCTGG AAGACACGGC ACGGGCGATA TTTGAAAAAT GGGACCTCGA TTTTGCCGTC
GTGGGCGAAA CAATCCCCGA AGATCGCTTC GTCATTGTCC ACAACGGCGA AACAAAGGCC
GATCTGCCCC TGTCCAAGCT GGCGTCCACC GCGCCCGAGT ACGACCGTCC CTGGGTGCCG
ACCGACCCGG CCCACGACAT GGACGCGGTG CCCGAGGTGG ATCCCATCGA CGCCCTGCGC
GCGCTTCTCT TCTCGCCCAA CTATTGCTCG CGCCAGTGGG TGTACCAGCA GTATGACCAT
CAGGTGATGG GCGACACCGT CATGTCCCCC GGCCTCGGCG CAGGCGTGGT GCGGGTTCAC
GGGACGGACA AGGCGCTGGC CTTCACCTCC GACGTGACGC CGCGCTACGT GAAGGCAAAC
CCTGTGGAGG GCGGCAAACA GGCGGTCGCG GAAGCCTACC GAAATCTGAC AGCTGTGGGT
GCCAAGCCTC TGGCAACAAC GGATAACATG AATTTCGGCA ACCCCGAAAA GCCGGAAATC
ATGGGCCAGT TCGTCGGCGC GATCAAAGGC ATTGGGGAGG CCTGCCTGGC CCTCGACACG
CCCATCGTCT CGGGCAATGT GTCGCTTTAT AACGAGACGG ACGGCACCGG CATTCTGCCC
ACGCCGACCA TCGGGGCCGT TGGCCTGCTC TCCAGCATGG ACGACCTGAT CGCAGGCACC
GCGCGCGACG GCCACGTTTT GCTTCTGGTG GGCGACACCA ACGGCCATCT GGGGCAATCC
GCCTTGTTGG CGGAGGTCTT CAACCGCGAA GACGGCGACG CGCCCCATGT CGATCTGGGG
GCCGAAAAGC GCAACGGCGA TTTCATCCGC GACAACCGCG ACTGGATCGG GGCCTGTACG
GACCTCAGCG ATGGCGGCCT CGCGCTGGCG GCATTCGAGG TCGCCCATGC GGCGGGCTGC
GGCATCACGC TTGATGTCGG CGACACCGCC ACGCTTTTCG GCGAGGATCA GGCGCGCTAT
CTGATCTCCA CCTCCTTCGA CGCAGCCGAA GCGCTGATGG TCGCTGCGGG CCGCGCGGGC
GTGCCATTGG CCACCGTCGG CAAAGTGGGC GGCGCCAGCC TGCGCATCGG CACATCTGAG
GCACCGCTTG CGGATCTGTC AGCGACCTAT ACCAACGCCT TCTCCCAAAC CTTCGCCTGA
 
Protein sequence
MTEPTITDDI IKAHGFTDDE YAEVNKILGR APNYTEMGIF SAMWNEHCSY KSSKKWLRTL 
PTEGPQVICG PGENAGIVDI GDGQCVVFKM ESHNHPSYIE PYQGAATGVG GILRDVFTMG
ARPIAAMNSL SFGEVAHPKT RQLVHGVVEG VGGYGNCFGV PTIGGEVRFH PAYNGNCLVN
AFAAGLADTD KIFYSAASGV GMPVVYLGAK TGRDGVGGAT MASAEFDDTI EEKRPTVQVG
DPFTEKRLLE ATLELMASGA VISIQDMGAA GLTCSAVEMG DKGGLGIRLN LDAVPIREDA
MTAYEMMLSE SQERMLMVLK PELEDTARAI FEKWDLDFAV VGETIPEDRF VIVHNGETKA
DLPLSKLAST APEYDRPWVP TDPAHDMDAV PEVDPIDALR ALLFSPNYCS RQWVYQQYDH
QVMGDTVMSP GLGAGVVRVH GTDKALAFTS DVTPRYVKAN PVEGGKQAVA EAYRNLTAVG
AKPLATTDNM NFGNPEKPEI MGQFVGAIKG IGEACLALDT PIVSGNVSLY NETDGTGILP
TPTIGAVGLL SSMDDLIAGT ARDGHVLLLV GDTNGHLGQS ALLAEVFNRE DGDAPHVDLG
AEKRNGDFIR DNRDWIGACT DLSDGGLALA AFEVAHAAGC GITLDVGDTA TLFGEDQARY
LISTSFDAAE ALMVAAGRAG VPLATVGKVG GASLRIGTSE APLADLSATY TNAFSQTFA