Gene Jann_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2168 
Symbol 
ID3934622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2174407 
End bp2174877 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID637904525 
Producthypothetical protein 
Protein accessionYP_510110 
Protein GI89054659 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.455167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGACG AGACACGTCA AGGGCGGCTG ATCCTGATCG ACGGCGACGC CTGCCCGGTG 
AAGGAGGAAA TCTACACCTG CGCCTATCGC CACAAGATCC CCGTGCGCCT GGTCGCGGCC
AGCTACCTGC GCCACCCCGA TCATCCGCTG ATCACCATGG TGATGGCGGG CGATGCGTTC
GATGCCGCCG ATGATGTGAT TGCGGAGGCC GCGGCCCCCG GCACGCTGGT CGTCACGGGT
GACATCCTGC TGGCGGAGCG GTGCCTGGAG GCGGGGTCAG TCGTGTTGAA CCACAAGGGC
GGGGCCTATA CCGCGAACTC CATCGGGGCG CAGGTGGCGA CGCGTGCGAT CATGGCGGAT
ATCCGCGCCG GCCTGGACGG GCAGGGCATC GGCGGGCAGA AGCCGTTCTC CAAGGCGGAC
CGGTCGGCCT TCTCCAACGC GCTGGAGACG GCGCTGCGGC GCTTGAAATA G
 
Protein sequence
MTDETRQGRL ILIDGDACPV KEEIYTCAYR HKIPVRLVAA SYLRHPDHPL ITMVMAGDAF 
DAADDVIAEA AAPGTLVVTG DILLAERCLE AGSVVLNHKG GAYTANSIGA QVATRAIMAD
IRAGLDGQGI GGQKPFSKAD RSAFSNALET ALRRLK