| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2167 |
|---|
| Symbol | |
|---|
| ID | 3934621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2173377 |
|---|
| End bp | 2174414 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637904524 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_510109 |
|---|
| Protein GI | 89054658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.388274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGC TCAGGCATGG CGATGCGGAG GCGTTGATTG ACCCTTCGGT CGGCAATATC
CCCCGGTGGC AAGTCTCGGG CCGTGTGCCG CTGCACGCCG CCCCCTGGCG CGACGAGCCG
GAGGTGCAGG ACGACCCGGA CGTGGCCCTT GTCGACAAGC GGCTGGCCGG GGACTTCTTC
TGCATGCCGT TCGGGCGTGA TGACGTCCAT GACGGGCCCA TTCATGGTCC CCCGGCCAAT
GATCCCTGGG ATCTGGTGGA TCAGGACGTC TCTGTCGCGC GGTTCGCGCT GTCGACGGGC
GTGTTTGGGG CCCATGTCAC GAAGGAGTTG CGGCTGGTCG GGCCCTGCCT GCTGCAAACC
CACGTTGTGG ACGGGGGCGC GAGCGATGTC AGTTTTGCCC ATCACCCGAT GTCCCGCATG
GCAGAGGGGG GGCGGCTCTC CTTCAGCCCG AAACGCGCCG TGCTGACCGA CCCTATGGCG
CAGCATGAAG GTGCAAACCT GTGGGCGGTC AATCAGTTAC GGGGCGACCT TAATCTGGAA
CGTCGTGAGA GTGGCCAGTG GCATGTCGGC ACATATCCCG CCGGTCTTGA GGTGGAGGAT
TTCTGTATCC TGGCCGAGGC GCGGGGCTCG GCCCTTGGCT GGACCTGCCT GATGCGCAAC
GCCGAGGATG ACATGCTGAT CGTCCTGAAG GACGCGAAAA TGCTGCCGAT CACGATGCTT
TGGATTTCCA ACGGCGCGCG GGATTTTCCG CCCTGGAACA GCCGCCACAT CGGCGTTCTG
GGGGTCGAGG ATGGATGCGC GATGGGGGGA GAGGGGCTTG CGGCGTCTAC GCGGGACAAC
CGGCTGACGG CCATGGGCGT GCCCACACAT CTGAGCCTTG GTCCGCGCCA CGTGATCCGC
CACGCGATGG TGTCGCTGCC GCGTCCGCCG GGCTGGTCGG AGATGACGTC GATCACATTG
CAGGGTGGAA AGCTGCACCT GCGCGAGGTC GGGGGCGGCA CAATGGTCAT TCCATTCCCG
GAGGGGCATT TTGACTGA
|
|---|
| Protein sequence | MIRLRHGDAE ALIDPSVGNI PRWQVSGRVP LHAAPWRDEP EVQDDPDVAL VDKRLAGDFF
CMPFGRDDVH DGPIHGPPAN DPWDLVDQDV SVARFALSTG VFGAHVTKEL RLVGPCLLQT
HVVDGGASDV SFAHHPMSRM AEGGRLSFSP KRAVLTDPMA QHEGANLWAV NQLRGDLNLE
RRESGQWHVG TYPAGLEVED FCILAEARGS ALGWTCLMRN AEDDMLIVLK DAKMLPITML
WISNGARDFP PWNSRHIGVL GVEDGCAMGG EGLAASTRDN RLTAMGVPTH LSLGPRHVIR
HAMVSLPRPP GWSEMTSITL QGGKLHLREV GGGTMVIPFP EGHFD
|
|---|
| |