| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2165 |
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| Symbol | |
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| ID | 3934619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2171220 |
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| End bp | 2172419 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904522 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_510107 |
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| Protein GI | 89054656 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.131423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA AGTTTTTGCT GGCATCCGCC GCTTCCATTG CGCTGACAGG CGCTGCCGCC
GCCGATGGCC ACCAGGGCGA TGTGACGCTT GGCGTGATCC TCGGCTTCAC CGGTCCGATT
GAATCGATCA CACCCGCCAT GGGCGACGGC GCAGAGCTGG CGATGGCCGA AGTCACCGAC
AGCGGTATGT TGTTTGGCGG CGCGGCCGTT ACGTCTGTTC GGGCTGACTC GACCTGCGTT
GACAGTTCCG CCGCACAAGC GGCCGCCGAG CGTCTGATCA CGTCCGATGG CGTGCACGGC
ATTGTCGGCG CCGATTGCTC CGGCGTCACC GGCTCCATTC TGGCCAACGT CGCCGTGCCC
AACGGCATGG TGATGATCTC GCCGTCCGCC ACCTCCCCCG GCCTGTCGAC GGCAGAGGAT
AACGGGTTGT TCTTCCGCAC CGCGCCGTCC GATGCGCGCC AGGGCGTCGT GATGGCCGAA
ATCATCATGG AACGCGGCAT CGACACCGTC GCGCTGACCT ACACCAACAA CGACTATGGC
CAGGGCCTGG CCGATGCCTT CTCTGCGGCG TTTGAAGAAG CGGGCGGCAC CGTCACGCTG
TCGGCGGCCC ATGAGGATGG CCGCGCGGAT TACTCCGCCG AAGTCGGCGC ACTTGCCTCC
GCCGGTGGTG ACGCGCTTGT CGTTGCGGGC TACGTGGACC AGGGCGGCTC CGGCGTGATC
CAGGCTGCAT TAGATACCGG CGCGTTTGAC ACCTTCGTGT TCCCCGACGG CATGGTCTCT
CAGGCGCTGG TCGACAATTT CGGCTCCGAC ATCGACGGGT CGTTCGGCCA GAACCCCGGC
ACCGACAGCG AAGGCGCGGG CCTCTATCAG GCCATGGCCG AGGAAGCGGG CTTTGACGGC
ACCTCGCCGT TCTCCGCGGA ATCCTATGAC GCCGCCGCCC TGCTCATGCT CGCCATGGCC
GCTGCGGAAA GCCGCAACGC CGCCGACTAT ATGGGTGAGA TCATGAACGT CGCCAACGCG
CCCGGCACCG AGATCCTGCC CGGCCAGCTT GGCATGGCGC TGGAAATGAT CGCCAACGGG
GAAGAGGTCG ATTATGTCGG CGCCTCCGCC GTGGAGCTGA TCGGGGGTGG CGAATCTGCC
GGCAATTATC GTGAGATCGA GATCTCCGGC GGGGAGCTGA CGGTCGCCGG TTACCGCTGA
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| Protein sequence | MMKKFLLASA ASIALTGAAA ADGHQGDVTL GVILGFTGPI ESITPAMGDG AELAMAEVTD
SGMLFGGAAV TSVRADSTCV DSSAAQAAAE RLITSDGVHG IVGADCSGVT GSILANVAVP
NGMVMISPSA TSPGLSTAED NGLFFRTAPS DARQGVVMAE IIMERGIDTV ALTYTNNDYG
QGLADAFSAA FEEAGGTVTL SAAHEDGRAD YSAEVGALAS AGGDALVVAG YVDQGGSGVI
QAALDTGAFD TFVFPDGMVS QALVDNFGSD IDGSFGQNPG TDSEGAGLYQ AMAEEAGFDG
TSPFSAESYD AAALLMLAMA AAESRNAADY MGEIMNVANA PGTEILPGQL GMALEMIANG
EEVDYVGASA VELIGGGESA GNYREIEISG GELTVAGYR
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