Gene Jann_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2155 
Symbol 
ID3934609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2163718 
End bp2164854 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content61% 
IMG OID637904512 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_510097 
Protein GI89054646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.301738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTA GACGCTTTCT CAAACTGACG GGGGGCGGCA TTGTTCTTGC CGCTGGAAGC 
GTTGGCGCTT TTGCCCTGAC CCGCACACCG ACCGATGCGC TGGCCCCGTG GACTCTTGCG
GGCAGCTACA GTGATCCGCG CATGAACGCG CTGTCCTATG CAATTCTGGC GCCGAACCCG
CACAACCGCC AGCCGTGGAT CGTGAGCCTT GACGGCGATG ACGGGCTGAC CCTGTATTTC
GATACCGAGC GACAATTGCC CCATACCGAC CCGTTTGACC GACAGTTGAC GATTGGCCTT
GGGTGCTTTC TGGAACTGAT GCGTATGGCG GCCAACGCCA ATGGCTACGA CGTCGATGTC
AGCCTGTTCC CCGAAGGCGA GGACAGGGAG CATCTGGACC AACGCCCTGT CGCGCGGGCA
ACCTTTGCCC GGGCCACGCC GGCGGCGGAC CCGTTGTTTG CCCATGTCAT GGACCGACGG
TCCAACAAAG AGCCGTTCGA GACGGCTCGT GCAGTCCCGG CCAACGCCCT TGCCCGGATC
TTGACCGTCG CCCGTCATAC CGAGATCGGC GGCTCGACGA CCGAGGTCGA CATCGCCTAT
TGGCGGCAAG TGTCATCGCA GGCCCTGACA ATCGAGATTG AAACGCCCGA CACCTACCGT
GAAAGCGTGG ATCTGATGCG GATTGGTAAG GCCGAGGTGA ACGCCAATCC CGACGGCATC
GATTTCAGCG GTGCGATGTT TGAAACATTG GCATTTGCGG GTGTCATGAC CCGCGATGCG
CTTCTGGACA CCTCATCCAT CGGGTTTCAA CAAGGTATGG CCGCGGTCCT TGCGAATACC
GAAACCGCGA TGGGACACCT TTGGATGGTC ACGCAGGGCA ACACACGCCG TAACCAGATC
GCGGCGGGTG GGGATTGGCT GCGCATCAAT CTGGCCTGCA CGGCGGAGGG TTTGGGATTT
CAACCGCTCA GCCAGGCGCT TCAGGAATAC CCGGAAATGA CGGCGCTTTA TGATGAAACA
CACCAGCGGC TTGCGCCGAA CGGCGGAACC GTTCAGATGC TGGCACGGAT CGGGTATGGT
CCCGAGGTGC CGGTCAGCCC CCGTTGGCCC ATAGATGCGA AGATTGGGGA CGCGTGA
 
Protein sequence
MNRRRFLKLT GGGIVLAAGS VGAFALTRTP TDALAPWTLA GSYSDPRMNA LSYAILAPNP 
HNRQPWIVSL DGDDGLTLYF DTERQLPHTD PFDRQLTIGL GCFLELMRMA ANANGYDVDV
SLFPEGEDRE HLDQRPVARA TFARATPAAD PLFAHVMDRR SNKEPFETAR AVPANALARI
LTVARHTEIG GSTTEVDIAY WRQVSSQALT IEIETPDTYR ESVDLMRIGK AEVNANPDGI
DFSGAMFETL AFAGVMTRDA LLDTSSIGFQ QGMAAVLANT ETAMGHLWMV TQGNTRRNQI
AAGGDWLRIN LACTAEGLGF QPLSQALQEY PEMTALYDET HQRLAPNGGT VQMLARIGYG
PEVPVSPRWP IDAKIGDA