| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2138 |
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| Symbol | |
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| ID | 3934591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2145849 |
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| End bp | 2146838 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904494 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_510080 |
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| Protein GI | 89054629 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.386307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.911823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTAA ATCAAAATGC TAGGCTGTCC ATCGCCCCGA TGATGGATTG GACCGACCGC
CATTGCCGGT ATTTTCATCG GCTGATGTCG CGGGATGCGT TGCTTTATAC GGAAATGGTC
ACCTCTGCCG CCGTGATCAA TGGTGACCGA AATCGGTTGC TGCGTTTTGA CCCGGCGGAA
CATCCTGTCG CGTTGCAATT GGGCGGGTCG GATCCTGCGG AGTTGGCGCA CGCGGTGCGG
ATTGTGCGCG ACTGGGGGTA CGATGAGGTG AATTTGAACG TCGGCTGCCC CTCGGATCGG
GTGCAATCGG GGTGTTTCGG GGCGGTCCTG ATGCGACAGC CCGATCTTGT GGCGGAGTGT
GTCCGCGCCA TGCGCGATGA ATGCCCGGTC GACGTGACCG TGAAATGCCG CATTGGGGTC
GATGATCAGG ACCCGGAGGA CGCGTTGCCG CGTTTCCTGG AGGCCATGGT GACGGCAGGG
GTGACGCGCG TGACGATCCA TGCCCGCAAA GCCTGGTTGC AGGGGCTGAG CCCGAAGCAG
AACCGCGACG TGCCGCCGCT CGATTATCCC TTGGTTTTCA GGATGAAGCA GATGTTCCCG
CAGCTGCATA TCTCACTCAA CGGGGGGATC GCGACGCTGG AGGAGGCGGG GGCGCATCTG
GAGGACGGGC TCGACGGCGT GATGATCGGA CGCGCGGCCT ATCACACTCC GGCAGAGGTC
CTGTTGCAGG CTGATCAACG CATTTTTGGC CATGCAACGC CAGCCCGCAG CGCAGAGGAG
GTGGCGCTGT TGATGTTGCC TTACATCGAC GCGCATCTGA CCGATGGCGG CCGCCTGAAC
CAGATCACGC GTCATATTCT GGGCCTCTTT GCAGGGCGTC CCGGTGCGCG TGGCTGGAAG
CGCATCCTGT CAGAGGGTGC ACACCAGGAC GGCGCTGGCC CGGAGTTGGT AGAGCGCGCC
CTGCAAGAGG TCATCACCCG CGCGGCGTGA
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| Protein sequence | MTLNQNARLS IAPMMDWTDR HCRYFHRLMS RDALLYTEMV TSAAVINGDR NRLLRFDPAE
HPVALQLGGS DPAELAHAVR IVRDWGYDEV NLNVGCPSDR VQSGCFGAVL MRQPDLVAEC
VRAMRDECPV DVTVKCRIGV DDQDPEDALP RFLEAMVTAG VTRVTIHARK AWLQGLSPKQ
NRDVPPLDYP LVFRMKQMFP QLHISLNGGI ATLEEAGAHL EDGLDGVMIG RAAYHTPAEV
LLQADQRIFG HATPARSAEE VALLMLPYID AHLTDGGRLN QITRHILGLF AGRPGARGWK
RILSEGAHQD GAGPELVERA LQEVITRAA
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