Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2134 |
Symbol | |
ID | 3934587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2142283 |
End bp | 2143173 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637904490 |
Product | periplasmic binding protein |
Protein accession | YP_510076 |
Protein GI | 89054625 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.342061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.620791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTCG GTTCCCGCTT TTCCCTCAGA CGCCTTACGC CCGGCGGCCT TGCCCTGATC ATGGCGTTTG GCCTTTTCGC AGCCTTCGTC GCGGGCCCCG CGCGTGCGCA GGATGATCCG CCTCGCGTCG TTGCCGTTGG CGGCTCCATC ACGGAAATCA TCTATGCCCT TGGGATGGAG GATCTGCTGG TCGCCCGCGA CACGACATCC AGCTGGCCCG CAGAGGTTGA GGCACTGCCT GACGTGGGCT ACATGCGCGC GCTGTCGCCC GAGGGTGTTT TGTCCGTGCG CCCGGACCTG ATCATCGCCG AGGAGGGGGC TGGCCCGCCC GAGACGATTG AGGTGCTGGC TGACGCGGAG ATCGAGTTCA TCACCGTGCC CGAAAGCTAT GATGCCGTGG GCGTGCGCCT GAAGATCATC GCCGTTGCAG AGGCGTTGGG TGTGCGTGAA GACGGCGTCG CCTTGGCCGA CCGGATCGAG GCCGATTTGT CTGAGGCTGT CGCGGCCATT TCCGGTGACG CGCCCCGCGT GATGTTCATC CTGTCCATGG AGGGCGGGCG CATCATGGCC TCCGGCACGG GCACCGCTGC AGATGGCATC ATTAACTTGG CAGGTGGGGA GAATGCCGTC TCGGCGTTCG AGGGTTATAG TCCGCTCACT GATGAAGCCG TCCTCTCCGC TGCCCCGGAT GTGATCTTGA TGATGGATCG CGGCGGCGAC CATTCGGCGG GCAACGCCGA TCTCTTCGCC CATCCGGCCC TGGGTCTGAC ACCGGCCGCC GAGGCCGATA GCGTTGTGCG GATCAACGGG TTGCTTCTTC TCGGGTTTGG TCCCCGCACG CCGGAGGCTG TCGCGCGGCT GTCGGCGGCG CTTGGCACCG TCGGGGGCTA G
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Protein sequence | MSLGSRFSLR RLTPGGLALI MAFGLFAAFV AGPARAQDDP PRVVAVGGSI TEIIYALGME DLLVARDTTS SWPAEVEALP DVGYMRALSP EGVLSVRPDL IIAEEGAGPP ETIEVLADAE IEFITVPESY DAVGVRLKII AVAEALGVRE DGVALADRIE ADLSEAVAAI SGDAPRVMFI LSMEGGRIMA SGTGTAADGI INLAGGENAV SAFEGYSPLT DEAVLSAAPD VILMMDRGGD HSAGNADLFA HPALGLTPAA EADSVVRING LLLLGFGPRT PEAVARLSAA LGTVGG
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