| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2125 |
|---|
| Symbol | |
|---|
| ID | 3934578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2134293 |
|---|
| End bp | 2135093 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637904481 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_510067 |
|---|
| Protein GI | 89054616 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0179374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.618435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGC CGCTTATCAC AATCGACGCG GGCACCATCG GCTATCGCGA CGTGCCCGTG
TTCCAGAACC TGACGCTCAC CATCCCGAAA GGCGAGGTCA CGGCCCTTTG CGGGCCAAAC
GGGTGCGGCA AGTCCACTGC GCTTAAAGCG ATGCGGGGGC TGTTGCCATT GACGGCGGGG
CAGATCCTGA TGGATGCCAT GCCCTTGGCA CATTGGGACG CGAAGGCGCT GGCCCGTGCG
GTCGCGATGT TGGGCCAGAC GCCCTCGGCC CCCGAAGAGA TGCGCGTGCG CGATCTGGTG
GCCTTGGGGC GCTATGCTCA CCGAAGACCC TTCGCTGGCC TTACCGGTTG CGACCACGCA
GCCATCGAGG CGGCGATCCG CGCCACGGAC ATGCACGCGC TGGCCGATAC GGCGCTGGCC
AATCTGTCCG GCGGCCAGGC GCAAAGGGCT TGGCTGGCTA TGGTTTTGGC TCAGCAATCC
CCGGTGATTT TCCTGGATGA GCCGACGAAC CACCTTGATA TCACCCACGC TCTCTCCACC
CTCTCGCTGG TGCGCACCAT GGCACGGGAC GCGGGCAAGA CCGTGGTGAT CGTGTTGCAC
GATCTGAACA TGGCCGCGAC CTTTGCCGAC CGGATCGTGC TGTTTAAGGA CGGGAAGATT
GCGGCGGACG GCCCCGTCAG GGCGGTTCTG ACTGCGGAGA CGGTGGAGGC GGTCTTCGAC
GTCCGCTGCG CCGTGCTGCA AAGACCGGAA AGTGACTTAC CTCTCATCGT GCCCCTGTTT
GCGAAGACGA TCCGCGACTA A
|
|---|
| Protein sequence | MLEPLITIDA GTIGYRDVPV FQNLTLTIPK GEVTALCGPN GCGKSTALKA MRGLLPLTAG
QILMDAMPLA HWDAKALARA VAMLGQTPSA PEEMRVRDLV ALGRYAHRRP FAGLTGCDHA
AIEAAIRATD MHALADTALA NLSGGQAQRA WLAMVLAQQS PVIFLDEPTN HLDITHALST
LSLVRTMARD AGKTVVIVLH DLNMAATFAD RIVLFKDGKI AADGPVRAVL TAETVEAVFD
VRCAVLQRPE SDLPLIVPLF AKTIRD
|
|---|
| |